Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0767 ATGAATGATTATGTCTATGCTCATGATTCACCAAAAGACTATCTTGATGCACACAACATAGCAAGATCAGAGTTGGGTGAACCGAATTTGGTTTGGGACGAAACGCTTGAAAAATATGCACAAAATTATGCCAATCAACGTAAACAAGATTGCCAGCTAATCCATTCACATGGTCCCTATGGAGAGAACCTTGCATGGAGCAGCAGCAATGATCTTTCTGGCGTTGATGCTGTGAAAATGTGGGTAGATGAGAAACCATACTTTAATTACTTGTTAAACATCTGTGCTGATAATCAAATGTGTGGCCACTACACTCAAGTGATTTGGGGCAACACATTGCGTGTTGGTTGTGCCAAAGTCATTTGTGACAATAATGGAGGCAGTTTCATTACTTGCAACTATGATCCTCCTGGCAATTACATTGGAGAGAGACCTTATTGA 441 0.4036 MNDYVYAHDSPKDYLDAHNIARSELGEPNLVWDETLEKYAQNYANQRKQDCQLIHSHGPYGENLAWSSSNDLSGVDAVKMWVDEKPYFNYLLNICADNQMCGHYTQVIWGNTLRVGCAKVICDNNGGSFITCNYDPPGNYIGERPY* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0767 146 PANTHER PATHOGENESIS-RELATED PROTEIN 1 8 146 - -
Amo20g0767 146 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 8 146 IPR001283 -
Amo20g0767 146 CDD CAP_PR-1 11 146 - -
Amo20g0767 146 Pfam Cysteine-rich secretory protein family 15 134 IPR014044 -
Amo20g0767 146 Gene3D CAP 9 146 IPR035940 -
Amo20g0767 146 PRINTS Allergen V5/Tpx-1 family signature 30 48 IPR001283 -
Amo20g0767 146 PRINTS Allergen V5/Tpx-1 family signature 77 90 IPR001283 -
Amo20g0767 146 PRINTS Allergen V5/Tpx-1 family signature 101 117 IPR001283 -
Amo20g0767 146 PRINTS Allergen V5/Tpx-1 family signature 129 142 IPR001283 -
Amo20g0767 146 PRINTS Venom allergen 5 signature 75 90 IPR002413 -
Amo20g0767 146 PRINTS Venom allergen 5 signature 30 48 IPR002413 -
Amo20g0767 146 PRINTS Venom allergen 5 signature 100 119 IPR002413 -
Amo20g0767 146 SUPERFAMILY PR-1-like 9 146 IPR035940 -
Amo20g0767 146 ProSitePatterns CRISP family signature 1. 102 112 IPR018244 GO:0005576
Amo20g0767 146 ProSitePatterns CRISP family signature 2. 129 140 IPR018244 GO:0005576
Amo20g0767 146 SMART SCP_3 9 142 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0767 Amo-Chr20 11112879 11113319 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0767 K13449 - zju:107427101 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0767 20 11112879 11113319 Amo20g0767 20 11112879 11113319 ECH