Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0765 ATGAAAACATGCAAGATTTCATTTTCTCTTATTTGTATCTTATTCGGCTTATTATGCATTACGAATGATTATGTCTATGGTCATGATTCACCAAACGACTATCTTGATGCACACAACATAGCAAGATCAGAGTTGGGTGAACCGAATTTGGTTTGGGACGAAACCCTTGAAAAATATGCACAAAATTATGCCAATCAACGTAAACAAGATTGCCAGCTAATCCATTCACATGGTCCCTATGGAGAGAACCTTGCATGGAGCAGCAGCAATGATCTTTCTGGCGTTGATGCTGTGAAAATGTGGGTAGATGAGAAACCATACTTTAATTACTTGTTAAACATATGTGCTGATAATCAAATGTGTGGCCACTACACTCAAGTGATTTGGGGCAACACATTGCGTGTTGGTTGTGCCAAAGTCATTTGTGACAATAATGGTGGCAGTTTCATTACTTGCAACTATGATCCTCCTGGCAATTACATTGGAGAGAGACCTTATTGA 501 0.3892 MKTCKISFSLICILFGLLCITNDYVYGHDSPNDYLDAHNIARSELGEPNLVWDETLEKYAQNYANQRKQDCQLIHSHGPYGENLAWSSSNDLSGVDAVKMWVDEKPYFNYLLNICADNQMCGHYTQVIWGNTLRVGCAKVICDNNGGSFITCNYDPPGNYIGERPY* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0765 166 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 21 166 IPR001283 -
Amo20g0765 166 CDD CAP_PR-1 31 166 - -
Amo20g0765 166 ProSitePatterns CRISP family signature 2. 149 160 IPR018244 GO:0005576
Amo20g0765 166 ProSitePatterns CRISP family signature 1. 122 132 IPR018244 GO:0005576
Amo20g0765 166 PANTHER PATHOGENESIS-RELATED PROTEIN 1 21 166 - -
Amo20g0765 166 PRINTS Allergen V5/Tpx-1 family signature 50 68 IPR001283 -
Amo20g0765 166 PRINTS Allergen V5/Tpx-1 family signature 97 110 IPR001283 -
Amo20g0765 166 PRINTS Allergen V5/Tpx-1 family signature 121 137 IPR001283 -
Amo20g0765 166 PRINTS Allergen V5/Tpx-1 family signature 149 162 IPR001283 -
Amo20g0765 166 SUPERFAMILY PR-1-like 25 166 IPR035940 -
Amo20g0765 166 Pfam Cysteine-rich secretory protein family 35 154 IPR014044 -
Amo20g0765 166 PRINTS Venom allergen 5 signature 50 68 IPR002413 -
Amo20g0765 166 PRINTS Venom allergen 5 signature 95 110 IPR002413 -
Amo20g0765 166 PRINTS Venom allergen 5 signature 120 139 IPR002413 -
Amo20g0765 166 Gene3D CAP 29 166 IPR035940 -
Amo20g0765 166 SMART SCP_3 29 162 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0765 Amo-Chr20 10998111 10998611 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0765 K13449 - zju:107427101 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0765 20 10998111 10998611 Amo20g0765 20 10998111 10998611 ECH