Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0456 ATGGAACTAGCTCAGCATAGAGCTATGGTGAATGGGAGAGTTGAGGAGATGCATGGGGAAAGTTCTGATCAAGTGCCTCTCAGGGAGTGCCGAATCCGTCCTTCTCACCCTGTAGGATTGGTGAAGAAGAGGGCTTATATCTTTGATGGAATGGGAAATTTTTACAATAAGGACTGGGATCTTGCAGAACTTTATCAGACGGAGCAGGTGGAAACAGATGTAGCAGATGGCCGGGCGAACGAGTTTTCTTGGTACCATGTAGAAATCCCAAAAGGAAATCAAAGGCCTTCACAATCTGCGCAAGATCTCATCAGTGTTCTTTGCCCGCCTTTGAAACTCCAAGACATTCTCTCACTTGTTAGCAATGGACCATTTTGTGCACATGTTGATGGGGCACTTGTGTTTCGAGTTAATTCACCTGGTCCTCCCTCTAGTGACTTCACATTTAGACTTTCTGCTAGAATTACAAAAAAGTCGGTAATTACTGTGTCCTTGGGACGTGTTCCCAGGTTAGGTTTCTCACGCATGGGTGAATCACTACTTTCTGAGATTCCTACCGTAGAAAGCTCCTCTCAGTTTAGAGGTCAACAGCAGGAAGGAAGTGGAATTGTGATTATGGAACATGTTCTTGAGTTCTTATTGACAATGAATCACTCCGAGGAAGCTGACAATCCTGTTCCTAGATCTGTCTCAAATCTTGTGGTTCACATAATTGACACACATATAGATCAGATTCAAGATCTTGTGACAAAGATTGAGATGGACTTGGACTCTGTGGAGCTTGATCTTGATAAAGGTGGTTATGCTCTGAAAAAACAAATGCTAGATGACAGAAGATTCCCCAAGCTGCATATTAATTTACAGCGTCTCCTACAGGTAATTTCCCATGGAGAGCAAGTATATCTCCGAGTTAAAGAAAAATGCTCGTCGAAACGGTGGTTTGCCAATGAAGACATCAACTCCCTTGAAGAACTAATTGGAAGGTTAAGGAGGCTGAAGGAGAATGTAGGTTTTATAGCAAATCGTGTAACAGCAGTACAGGCTAGTCTTGACAGCTGGCAGTCGGAGCAAATAAACAGGAAACTGTACTATCTTTCGTTCCTTTCGATAATATTCCTCCCCTTATCCATCATAACAGGAGTGTTTGGCATGAATGTTGGTGGAGTTCCATGGACAGGGCAGAATTCGCCGGAGCTACAAGATGGTTTCCGAAACGTCCTGCTACTCTGCGTGGCGATGCTATTTCTTGTGCTTCTCTGCTTTGTTTTTCCGACTCTTTACACTCGCGTAGCTGCTGTATGGCAGAAAAGGAAAGGTCCCGGAAGAAGCTGGTCACTAAACAGGAAGTCGTTCCTCAAGAGACCGTTACGAATAGGAGATCAAGATAGAGGGGGCTACCTTCGGATCTAA 1410 0.4418 MELAQHRAMVNGRVEEMHGESSDQVPLRECRIRPSHPVGLVKKRAYIFDGMGNFYNKDWDLAELYQTEQVETDVADGRANEFSWYHVEIPKGNQRPSQSAQDLISVLCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPSSDFTFRLSARITKKSVITVSLGRVPRLGFSRMGESLLSEIPTVESSSQFRGQQQEGSGIVIMEHVLEFLLTMNHSEEADNPVPRSVSNLVVHIIDTHIDQIQDLVTKIEMDLDSVELDLDKGGYALKKQMLDDRRFPKLHINLQRLLQVISHGEQVYLRVKEKCSSKRWFANEDINSLEELIGRLRRLKENVGFIANRVTAVQASLDSWQSEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNSPELQDGFRNVLLLCVAMLFLVLLCFVFPTLYTRVAAVWQKRKGPGRSWSLNRKSFLKRPLRIGDQDRGGYLRI* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0456 469 Pfam CorA-like Mg2+ transporter protein 223 423 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo20g0456 469 PANTHER OS08G0130000 PROTEIN 1 469 - -
Amo20g0456 469 SUPERFAMILY CorA soluble domain-like 79 353 IPR045861 -
Amo20g0456 469 Gene3D Magnesium transport protein CorA, transmembrane region 354 426 - -
Amo20g0456 469 Gene3D Magnesium transport protein CorA, transmembrane region 227 353 - -
Amo20g0456 469 PANTHER OS08G0130000 PROTEIN 1 469 - -
Amo20g0456 469 Coils Coil 315 342 - -
Amo20g0456 469 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 357 422 IPR045863 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0456 - - gmx:100804031 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0456 20 5648541 5653366 Amo20g0456 20 5648541 5653366 ECH