Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0454 ATGGCCGCTAAGAAAAGGAACTCTTCCATCGACGACGAACCTGTCGTCGAAGTACCCGCAGCTGAAACCAACGATTCTCCGAAGCCCCCAAAGAAGAAAACCAAGAAAGACAAAAGCAATAACGACAGTGATGAGCCACAAGAACAGGTGGCGGCAGCATCTGATGGCTCCGTCAAGCCAATGGAGAGGAAGAAGAAGCGCAAAGCTCTCGACAAGGAGAGGCGCCGCACCGCCGCTGACACCGAGCCGAAGCTTCCGGAGCCGTCGACCTCCGCAGCACAGGCTCAGCCAGTGGACTCGCCCGGAACCAGCAGCGGCGGAGGCTCTCAGCTCCCGGAGTTTCACATTGGCGTGTTCAAGGATCTCGCGGTGGCGGCGGAGCCTGCGAGGGAAGCGGCCGCAAAACAGCTGGTGACCGAACTGAAGGCGGTTCAGAGTGCTTACGATGCGCTTGATGAGAAGGAGGTTGGCGACGGAGGGTTCAAGCTTGAAGCTGAAAAGGATGATGGATTGGATGATTGTGCACCTTCTGTTAGATACGCTGTTCGCAGGCTTATTCGTGGTGTTTCTTCCTCTAGAGAGTGTGCACGACAAGGTTTTGCTTTAGGTTTAACTCTTTTAGTTGGTGCTGTCCGCAAGATTCGGGTTGAATCATTCCTTAAACTTGTAGTTGATTTATTGGAAGTAACTTCGTCAATGAAGGGTCAGGAGGCAAAGGATTGTCTCTTGGGTCGCTTATTTGCCTATGGTGCATTGGCTAGATCGGGAAGACTTACACAGGAATGGACTATAGATAAAAACACATCATGCATTAGAGAATTTGTCAGTGTAATAATCTCTCTGGCGAATAAAAAGCGGTACTTGCAAGAGCCTGCTGTTTCAATAATTTTAGACTTAACTGAAAAGTTGCCTGTTGAAGCGTTGTTGAATCATGTTGTTGAAGCTCCGGGGATGAAGGAATGGTTTGACGCTGCTATGGAAGTAGGAAATCCTGATGCTTTGCTTCTTGCACTAAAACTACGAGAAAAGATTTCCATTGACAACTCTGCATTTGTCAAACTGCTGCCAAATCCATTCAGCTCTAGCCTGCTCTTTTCCACTGATCAGCTTTCCTCCCTGAGCAATTGCTTGAAGGAGTCAACCTTTTGTCAGCCCCGTGTTCATGGTGTTTGGCCTGTTTTAGTAAATATTCTTTTGCCTAATACTATTATGCAAGAAGAAGATGTGGCAGCAGCTTCAAATTCGTTAAAGAAGCATAAAAAGAGTCGAAAATCAAGCTCCTATGATGAAGAAACTGCAAAGAATCTTCAGTCTTTCTGCGAAATAATTATTGAAGGATCCCTTCTCTTGTCATCTCATGACCGTAAGCATTTAGCTTTTGATGTTCTGTTTCTTCTACTCCAAAAGCTGTCTGCATCTTTGGTTCCAATCATTCTATCAAGCAAAGTTGTTCAGTGCCTTATGGATATACTATCAACGAAAAACACTTGGCTGTATAAAGTTGCTCAGCATTTTCTCAAACAATTGTCTGATTGGGTTGGAGATGATGATGTCAGAAGAGTTGCTGTTATAGTTGCTCTACAGAAACACAGCAATGGAAAATTTGATAATCTCACACGAACAAAAGCTGTAAAAGATTTCATGTCACACTTCAAAACAGAAGCAGGTTGCCTGCTTTTTATTCAGAGCTTGATGAACCTGTTTGTAGATGAAGGCAGTGCCTCGGAAGAACCTTCAGACCAGAGTCAAACTACAGATGAAAATTCCGAAATAGGTTCCGTTGATGATAAGGATTCCCCAAGGTCCAATGGCAATTCTGATTTTTTAAAGAGTTGGATTATTGAATCTCTTCCCAGCATTTTGAAACACTTGAAGCTGGGTCATGAGGAGAAATTCCGAGTACAGAAAGAAATCATGAAATTTCTGGCTGTTCAAGGTCTGTTCACTGCGTCTCTTGGATCTGAGGTTACTTCTTTTGAGTTGCAGGAAAAATTCAGGTGGCCAAAATCACCCACATCGAATGCTCTTTGCAAGATGTGTGTTGAACAGCTCCAGTTATTATTGGCAAATGCTCAGAAGGGAGAGGGGTCACGAGCTTCGGCTAGTAGCCTTGAGCCAAATGATCTTGGCCTGTACTTCATGAAGTTCTTCAGCACCCTATGCAATATTCCTTCAGTTTCCCTATTTCGTACCTTAGATGATGAGGATGATAAAGCAGTAAAAAAATTACAAGCAATTGAAGCAAAATTATCCAGAGAGGAAAGGAGCCATGGGCTTAGTCCTGAAGCTAATAGATTGCATGCACTGAGGTACTTGCTTATCCAATTGCTTCTGCAAGTGCTTCTTCAACCAGGGGAGTACTCAGAAGCTGCATCTGAACTCATCATCTGCTGTAAGAAAGCATTTTCTGCTTGTGATCTTCCTGACTCATCTGGAGATGATGATTTGGAGGCTGATGATGCACCTGAGTTGATGGATGTTCTTGTGGATACATTACTTTCACTGCTTCCACAGTCATCAGCTCCTATGCGATCTTCTATTGAGCAGGTATTCAAATACTTCTGTGATGATATTACTGATGATGGACTGATGCGGATGTTGCGGGTCATCAAGAAAAACTTAAAACCTGCTAGACATCCTGATGCAACAAGCGCAGAAGATAGCGATGGCGATGACGACGATGACTTTATCAATATCGAAGAGGAAGATATTGATCAAGCTGAGACAGGTGAAACAGGTGAGACTGATGAGCAGACTGATGACTCGGATTCTGTTGTTGAGGCTGAGGAAAATGATCAGGGCCATCCTGAAGCTTCTGATGACTCTGATAGCGGAATGGATGATGATGCAATGTTCAGGATTGATACGTATCTGGCCCAGATTTTCAAGGAGAAGAAAAATCAGGCTGGAGGTGAAACTGCCCATTCCCAGCTTGTGTTGTTCAAACTTCGTATCCTTTCATTGTTGGAAATTTTCCTTCATGAAAATCCAGGTAAGCCTCAGGTTCTTATGGTGTACTCAAATTTGGCTCGAGCTTTTGTTAACCCACATACAGCAGAAGTTAGTGAGCAGCTTGGACAGCGTATTTGGGGTATATTACAAAGGCAAATATTTAAAGCCAAGGATTATCCAAGGGGTGAAGGGGTTCAACTATCAACTCTTGAACCTTTGTTGGAAAGAAATTTGAAATTGGCGTCAAAACCATTGAAGAAACAAAAGTCTGCATCAAATCCATCAAAGAAATCAGCTTCATGGAACCGACAGAAAATGGTTTCCTCCCTTGCCCAAACATCAACCTTTTGGCTTTTGAAGATTATTGATGCAAGAAACTTCTCAGAGTCCGAACTCCAGAGGGTGGTTGATATTTTTCGGGAAGTTTTGGCTGGGTATTTTGACAGTAAAAAGTCTCAAATCAAATCTGGGTTTTTAAAAGAAATATTCCGAAGACGACCATGGATTGGGCATGCTGTGTTTGGCTTTATTTTGGAGAGATGTGGAAGTTCCAAGTCAGACTTCCGACGAGTGGAGGCACTAGATTTGGTAATGGAAATATTGAAGTCACTGGTGACGCTGAGTAGTGATAATCAGAATGCAGCCAAAAAGGTTCTTAAGAGCAATTTGGATAAGCTCTGCAATTTAATGAAAGATTTGGTGACAAATATGCCAAGCAAGCAAGCAAGGAGGTCAGAGGTACAGAAATTTTGTATAAAGACCTTTGAAATCTTGACTAAACTCAACCTCACCAAGTCTTTTATTAAAGCTCTGGCGCCTGATGTTCAAGCTGCTCTTGAGGCACAACTTGGTGAGCAGTTCATTAATTTGAAGCAGCTGGGAAAATAA 3840 0.4328 MAAKKRNSSIDDEPVVEVPAAETNDSPKPPKKKTKKDKSNNDSDEPQEQVAAASDGSVKPMERKKKRKALDKERRRTAADTEPKLPEPSTSAAQAQPVDSPGTSSGGGSQLPEFHIGVFKDLAVAAEPAREAAAKQLVTELKAVQSAYDALDEKEVGDGGFKLEAEKDDGLDDCAPSVRYAVRRLIRGVSSSRECARQGFALGLTLLVGAVRKIRVESFLKLVVDLLEVTSSMKGQEAKDCLLGRLFAYGALARSGRLTQEWTIDKNTSCIREFVSVIISLANKKRYLQEPAVSIILDLTEKLPVEALLNHVVEAPGMKEWFDAAMEVGNPDALLLALKLREKISIDNSAFVKLLPNPFSSSLLFSTDQLSSLSNCLKESTFCQPRVHGVWPVLVNILLPNTIMQEEDVAAASNSLKKHKKSRKSSSYDEETAKNLQSFCEIIIEGSLLLSSHDRKHLAFDVLFLLLQKLSASLVPIILSSKVVQCLMDILSTKNTWLYKVAQHFLKQLSDWVGDDDVRRVAVIVALQKHSNGKFDNLTRTKAVKDFMSHFKTEAGCLLFIQSLMNLFVDEGSASEEPSDQSQTTDENSEIGSVDDKDSPRSNGNSDFLKSWIIESLPSILKHLKLGHEEKFRVQKEIMKFLAVQGLFTASLGSEVTSFELQEKFRWPKSPTSNALCKMCVEQLQLLLANAQKGEGSRASASSLEPNDLGLYFMKFFSTLCNIPSVSLFRTLDDEDDKAVKKLQAIEAKLSREERSHGLSPEANRLHALRYLLIQLLLQVLLQPGEYSEAASELIICCKKAFSACDLPDSSGDDDLEADDAPELMDVLVDTLLSLLPQSSAPMRSSIEQVFKYFCDDITDDGLMRMLRVIKKNLKPARHPDATSAEDSDGDDDDDFINIEEEDIDQAETGETGETDEQTDDSDSVVEAEENDQGHPEASDDSDSGMDDDAMFRIDTYLAQIFKEKKNQAGGETAHSQLVLFKLRILSLLEIFLHENPGKPQVLMVYSNLARAFVNPHTAEVSEQLGQRIWGILQRQIFKAKDYPRGEGVQLSTLEPLLERNLKLASKPLKKQKSASNPSKKSASWNRQKMVSSLAQTSTFWLLKIIDARNFSESELQRVVDIFREVLAGYFDSKKSQIKSGFLKEIFRRRPWIGHAVFGFILERCGSSKSDFRRVEALDLVMEILKSLVTLSSDNQNAAKKVLKSNLDKLCNLMKDLVTNMPSKQARRSEVQKFCIKTFEILTKLNLTKSFIKALAPDVQAALEAQLGEQFINLKQLGK* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0454 1279 MobiDBLite consensus disorder prediction 877 896 - -
Amo20g0454 1279 MobiDBLite consensus disorder prediction 87 110 - -
Amo20g0454 1279 Coils Coil 134 154 - -
Amo20g0454 1279 MobiDBLite consensus disorder prediction 26 44 - -
Amo20g0454 1279 MobiDBLite consensus disorder prediction 1 112 - -
Amo20g0454 1279 MobiDBLite consensus disorder prediction 902 927 - -
Amo20g0454 1279 PANTHER MYB-BINDING PROTEIN 1A FAMILY MEMBER 103 1276 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Amo20g0454 1279 MobiDBLite consensus disorder prediction 902 947 - -
Amo20g0454 1279 MobiDBLite consensus disorder prediction 1068 1087 - -
Amo20g0454 1279 MobiDBLite consensus disorder prediction 574 603 - -
Amo20g0454 1279 Pfam DNA polymerase phi 180 993 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Amo20g0454 1279 MobiDBLite consensus disorder prediction 928 947 - -
Amo20g0454 1279 MobiDBLite consensus disorder prediction 1070 1087 - -
Amo20g0454 1279 MobiDBLite consensus disorder prediction 58 82 - -
Amo20g0454 1279 MobiDBLite consensus disorder prediction 575 589 - -
Amo20g0454 1279 SUPERFAMILY ARM repeat 175 1241 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0454 Amo-Chr20 5636397 5642675 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0454 K02331 - gmx:100787296 1903.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0454 20 5636397 5642675 Amo20g0454 20 5636397 5642675 ECH