Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0446 ATGGTGAAGAAGCTTGAAATGTTGCCGGCGAAGGACGTGGATTTGTCCTCCGTCAAATATGAACATGAAGTTGTCAAAGCTCCGCATTTGACTGGATTCGTGTTTCGATTCTTTGTGAGGATACTTGAACTTCCATTGATAGGTCCTGCTATCATGACTCATTTGAAGAAGGACAACAAAATTGATCAGTTACTGCGGCATACTGTGATACCAGAAGGACCGATGTTTAAACCTGAATATCCACCTCGAGAAACGGAACCTGGTGTTGTAGTCCTTGATGAAGATGGGAGCCCTGCAAGCCGAGTAGAGTCTGCCTTGAAATGTCTGCCACAGTATGATCCTTCTAAATCCTGGGAAGATTCATCCTTACCCTTTCGGTACTGGAAGATACGAGACTATGCTCATGCCTATCGATCTGGAAAAGTAACCCCGTCTATGGTTGCTGAGCGCATCATCTCAGTTATAGAGGAGAATTGCAGAATTAAGCCACCAGCGCCACTTTTGATATCGTTTGATGCTGCAGAAGTCCGGAAGCAGGCAGCAGCATCTACTCAGAGGTTCGAAGCAGGAAATCCGTTATCAATATTAGATGGAATTTTCATCGCGATCAAAGATGATATAGACTTGTATCCCCATCCATCTAAGGGTGCAAGTACGTGGATGCATGAGGTACGTACTGTAAAGGAGGATGCAATCTGTGTTTCAAGGCTGCGTAGCTGTGGTGTCATTTTTGTTGGGAAGGCAAATATGCATGAGTTTGGAATGGGTACAACTGGAAATAATCCTAACTACGGAACTACAAGAAATCCTCATGCACCTGATAGGTATACTGGTGGATCTTCTTCTGGTCCAGCTGCAATTGTGGCATCTGGAATATGTTCTGCTGCACTGGGAACTGATGGTGGAGGTTCTGTTCGTATTCCTTCTTCCCTTTGTGGTGTGGTGGGACTGAAATCAAATTATGGGCGAACAAGCATGCAGGGGTCATTATGTGATAGTGGAACGGTAGAAATTATTGGACCGATTGCTTCATCAGTAGAGGATATCATGCTAGTGTACGCGGCAATGTTGGGTGCATCACCGGAAAATAGAATCAGCTTGAGACCGTCACCACCTTGCTTGCCAGCTTTGTCATTAGATGATTCAGATATTTTGGGATCATTAAGAATAGGGAAGTATACAGCGTGGTTTAATGATGTTCATTCGACTGAAGTATCCGACAAATGTGAGGATGCTCTGAATCTGTTGACAAAGGCGCATGGTTGTGAAATAATAGAGATTGTTATACCAGAGCTTCATGAGATGCGAACTGCCCATGTTGTTTCCATTGGCTCGGAATGCTTATCTTCAATAAATGCTGATTGTGAAGACGGGAAAGGGGTAAAATCAACATATGATACACGGACTAGTATGGTACTTTTTCGGTCGTTTACAGCAGCAGATTATATTGCAGCCCAACGTATTAGACGAAGGATTATGCATTATCACATGGAAATTTTCAAGAAGGTGGATATCATAGTGACACCAACAACTGGCATGACAGCACCCAAGATCCCTCCTAGTGCTCTGCAAAGTGGTGAGACAGATATGCAGACAACAGCTTACCTTATGCGATTCATTATAGCGGGGAATCTTCTGGGACTCCCTGCTATTAGTGTCCCGGTTGGTTACGATAAATCAGGACTTCCAATAGGTTTGCAGGTGATAGGCCGACCGTGGGCGGAAGCTACAATTCTGCGTATAGCATCTGCAGTGGAGAGACTCTATGGTGAGTCAAAGAAAAGGCCACTGCAATATCATGACGTTCTGAGGACAAACTGA 1821 0.4432 MVKKLEMLPAKDVDLSSVKYEHEVVKAPHLTGFVFRFFVRILELPLIGPAIMTHLKKDNKIDQLLRHTVIPEGPMFKPEYPPRETEPGVVVLDEDGSPASRVESALKCLPQYDPSKSWEDSSLPFRYWKIRDYAHAYRSGKVTPSMVAERIISVIEENCRIKPPAPLLISFDAAEVRKQAAASTQRFEAGNPLSILDGIFIAIKDDIDLYPHPSKGASTWMHEVRTVKEDAICVSRLRSCGVIFVGKANMHEFGMGTTGNNPNYGTTRNPHAPDRYTGGSSSGPAAIVASGICSAALGTDGGGSVRIPSSLCGVVGLKSNYGRTSMQGSLCDSGTVEIIGPIASSVEDIMLVYAAMLGASPENRISLRPSPPCLPALSLDDSDILGSLRIGKYTAWFNDVHSTEVSDKCEDALNLLTKAHGCEIIEIVIPELHEMRTAHVVSIGSECLSSINADCEDGKGVKSTYDTRTSMVLFRSFTAADYIAAQRIRRRIMHYHMEIFKKVDIIVTPTTGMTAPKIPPSALQSGETDMQTTAYLMRFIIAGNLLGLPAISVPVGYDKSGLPIGLQVIGRPWAEATILRIASAVERLYGESKKRPLQYHDVLRTN* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0446 606 Gene3D Amidase signature (AS) domain 130 589 IPR036928 -
Amo20g0446 606 PANTHER TRANSAMIDASE 4 604 IPR000120 GO:0003824
Amo20g0446 606 Pfam Amidase 169 579 IPR023631 -
Amo20g0446 606 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Amo20g0446 606 SUPERFAMILY Amidase signature (AS) enzymes 113 589 IPR036928 -
Amo20g0446 606 PANTHER GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A-RELATED 4 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0446 Amo-Chr20 5509177 5517648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0446 1 606 Acyl Lipid Metabolism Gene Families AT5G64440 65.625 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0446 - - gmx:100778732 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0446 20 5509177 5517648 Amo20g0446 20 5509177 5517648 ECH