Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0414 ATGGGTTCTGAGAAGGAAATAAGTGGTGGCGGTTTGGCATCTGCAGCTATAACAACAACAACAACAACAGGTTCAAAGCAAAAGAACCTTGATGATTGGCTTCCCATAACTGCTTCAAGAAATGCGAAATGGTGGTATTCTGCTTTTCACAACCTCACGGCCATGGTTGGTGCTGGAATTCTCAGCCTTCCTTATGCCATGTCACATATGGGATGGGGTGCTGGTGTTACAGTGATGATCCTGTCATGGATAATCACACTATACACGCTATGGCAAATGGTTGAGATGCACGAAATGGTACCTGGGGGAAAGAGAAACGACAGGTATCATCAGTTGGGACAAGAAGCTTTCGGAGAAAAGCTTGGTCTGTGGATTGTGGTTCCTCAACAACTGCTTGTTGAAGTTGGTACATGCATTGTATACATGGTCACTGGAGGCAAATCTTTGAAAAAAGTTCATGAAACCTTTTGTCCTGATTGTAAACAAATCAGAACCACTTATTGGATCATGGTGTTTGCTTCTGTAAACTTTGTGCTTGCACAAATTCCTAACTTTAACTCTATTTCCGCTATCTCTGCTGGTGCAGCCGTCATGTCTCTCAGTTACTCAACAATCGCTTGGGCTGCGTCTATCAAGAAAGGGATTTCAAAGGACATAGACTATACTGTAAAAATGAATAGCACGAGCGATGGTGTGTTCAATTTCTTCTCTGCATTGGGAGATGTGGCATTTGCATACGCAGGCCACAATGTGGTTCTTGAAATCCAAGCTACAATGCCTTCAACTGCGGAGAAACCTTCTAAGATACCAATGTGGAGAGGGTGTGTTTTGGCATACATTGGAGTTGCATTATGCTACTTCCCTGTTGCCTTTATTGGGTACTACATGTTTGGAAATTCTGTGGATGATAACATCCTCATCACACTCCAACGCCCTGCTTGGCTTATTGGCATTGCTAACTTGTTTGTTGTCATCCATGTTGTTGGAGGCTACCAGGTATTTGCAATGCCAGTGTTTGATATGATTGAAACCTTCTTGGTTACACGCTTGAATTTCTCACCTTCTACTACCCTGCGATTCACAACTCGCTTTCTATATGTTGCAATTACAATGTTCATAGGAATTTGTGTCCCATTTTTTGGGTCTCTTCTTGGATTTCTTGGTGGATTCGCATTTGCTCCCACCTCTTATTATCTACCATGCATCATATGGCTTAAGCTCAAGAAACCTAAAAAATATGGCTTGTCTTGGACGATTAATTGGATATGTATTATTATTGGAATATTGATAATGACACTATCTCCTATTGGTGCATTGAGGAATATCATTATGTCAGCCAAGGATTACAAATTTTTCTCATGA 1362 0.4141 MGSEKEISGGGLASAAITTTTTTGSKQKNLDDWLPITASRNAKWWYSAFHNLTAMVGAGILSLPYAMSHMGWGAGVTVMILSWIITLYTLWQMVEMHEMVPGGKRNDRYHQLGQEAFGEKLGLWIVVPQQLLVEVGTCIVYMVTGGKSLKKVHETFCPDCKQIRTTYWIMVFASVNFVLAQIPNFNSISAISAGAAVMSLSYSTIAWAASIKKGISKDIDYTVKMNSTSDGVFNFFSALGDVAFAYAGHNVVLEIQATMPSTAEKPSKIPMWRGCVLAYIGVALCYFPVAFIGYYMFGNSVDDNILITLQRPAWLIGIANLFVVIHVVGGYQVFAMPVFDMIETFLVTRLNFSPSTTLRFTTRFLYVAITMFIGICVPFFGSLLGFLGGFAFAPTSYYLPCIIWLKLKKPKKYGLSWTINWICIIIGILIMTLSPIGALRNIIMSAKDYKFFS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0414 453 Gene3D Amino acid/polyamine transporter I 37 447 - -
Amo20g0414 453 PANTHER OS05G0424000 PROTEIN-RELATED 21 448 - -
Amo20g0414 453 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 21 448 - -
Amo20g0414 453 Pfam Transmembrane amino acid transporter protein 41 438 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0414 Amo-Chr20 5199177 5207085 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0414 12 453 Organic Solute Cotransporters AT1G24400 72.851 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0414 - - adu:107468917 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0414 20 5199177 5207085 Amo20g0414 20 5199177 5207085 ECH