Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4565 ATGGCGGACGACGAATTCGCCGATGAACTGGAGCCCTTGTTTGATTACAGTCGCGTTCAGCCCCCCGTCATTCCCCTCGACGATGCAGATGATGATGATGATAAGGATGCTGTTCCCCCCAAGAAGGGAAAAACCTCTCATGATCCTGTTGTGCCTGAGAAGAAGAAGACTGACGTGAAGCCGGTGCCGGTGGTGGATATTGACGATGAGGATGATTGGTTGCCTCCTCCACCAAAGGTCTCCACTGATGCACACAAGTCTATTGATGAAGATTCAACACTCAAGAAGTTGAGATTGAAGAAGCAYGAACTTCAAGATTTGTTCAAAACTGTTGAGGAGTCTGAAAAAAGTGAAATCTGTGATTCACCGAAGTCTTCCATGGATGATACAAGTGAGAAAACATCAAAACCTGCAGAAAGACCTAAGATTTTGATCTCAATTCAAGACAAGAGCGAAAAGAAGCCAGTTCGTGTGTACAGGGATGACAAGTTTGAAAGGATTTTCAAAATGTATGCTGAGAAACTGGGATGTGATCAAAACAAGATAGTGTTATCATTTGATGGTGATAAAATCAGTCCTTCCGAAACCCCGGATATCCTTGGGATGGAAGATGGTGACATGATTGAAGTTCATGTGAAATCAAGCTGA 648 0.4367 MADDEFADELEPLFDYSRVQPPVIPLDDADDDDDKDAVPPKKGKTSHDPVVPEKKKTDVKPVPVVDIDDEDDWLPPPPKVSTDAHKSIDEDSTLKKLRLKKHELQDLFKTVEESEKSEICDSPKSSMDDTSEKTSKPAERPKILISIQDKSEKKPVRVYRDDKFERIFKMYAEKLGCDQNKIVLSFDGDKISPSETPDILGMEDGDMIEVHVKSS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4565 215 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 6 215 - -
Amo19g4565 215 MobiDBLite consensus disorder prediction 110 154 - -
Amo19g4565 215 Gene3D - 125 215 - -
Amo19g4565 215 MobiDBLite consensus disorder prediction 35 76 - -
Amo19g4565 215 Pfam Ubiquitin-2 like Rad60 SUMO-like 145 211 IPR022617 -
Amo19g4565 215 Coils Coil 94 114 - -
Amo19g4565 215 CDD Ubl_SUMO_like 142 211 - -
Amo19g4565 215 SUPERFAMILY Ubiquitin-like 131 213 IPR029071 -
Amo19g4565 215 MobiDBLite consensus disorder prediction 1 92 - -
Amo19g4565 215 ProSiteProfiles Ubiquitin domain profile. 141 215 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4565 Amo-Chr19 163163709 163166162 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4565 - - aprc:113871079 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4565 19 163163709 163166162 Amo19g4565 19 163163709 163166162 ECH