Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4484 ATGGTTAATGCAATGGCAATAGACTGCATGCACTCCATCCCTCAACCACCAAAAGAATCCCCATTGGTGTTTGATGCCTCCGTCCTCAGCCACCAACTCAACCTACCGTCACAATTCATTTGGCCTGACCATGAGAAAGCCTCTGTCCATGTCCCTGAGCTTCAGGTCCCATTCATTGATCTCGGAGGCTTCCTTTCTGGCGATCCCCTCGCTGCAATGGAAGCCTCAAGCCTTGTTGGCGAAGCATGCCGGAAGCACGGCTTCTTCCTTGTCGTCAACCACGGCATAGACAGGAACTTGATCACCGATGCTCACGCTTTGATGGATGATTTCTTTGAGCTTCCCCTGTCTCAGAAACAGAGAGCTCAGAGGAAAACAGGGGAGCACTGTGGCTATGCTAGTAGCTTCACCGGTAGATTTTCTTCTAAGCTTCCATGGAAGGAGACACTCTCCTTTCAATACTCAGCAGAAAAAAAACACTTACCCAACCTTGTCAAGGACTACCTTTGCAGTAAACTGGGCAAAGAGTTTGAGCAATTCGGGAAGGTGTATGAGACGTACTGTGAGGCAATGAGCAATCTTTCTTTGGGGATAATGGAGCTTCTGGGGATGAGCCTTGGAGTTGGCAAATCGTATTTTCGAGAATTCTTTGAAGAGAACAATTCAATAATGAGGCTCAATTACTACCCTCCTTGTCAAAAACCTGACCTCGCCTTGGGAACTGGACCTCATTGTGATCCAACATCCTTAACCATTCTCCACCAAGACCAAGTTGGTGGCCTCCAAGTTTATGTTGACGATCAGTGGCACTCAGTTACTCCGAATTTCAATTCTTTTGTCGTCAATATTGGTGATACCTTCATGGCTCTTTCAAATGGGAGATACAAGAGTTGTTTGCATAGGGCAGTGGTAAATAGTAAGACAACAAGAAAATCACTTGCTTTCTTTTTGTGTCCAACAAGTGACAAGCTTGTGACGCCACCATGTGAGTTAGTGGACAATTTGAGCTCAAGGCTCTACCCTGATTTTACATGGTCCATGCTCCTTGAGTTTACTCAGAAGCACTACAGAGCTGACATCAGAACCCTTGATGAATTCACCAAATGGCTTCAACGGAAGGACGATAAGATTATTTGA 1137 0.4582 MVNAMAIDCMHSIPQPPKESPLVFDASVLSHQLNLPSQFIWPDHEKASVHVPELQVPFIDLGGFLSGDPLAAMEASSLVGEACRKHGFFLVVNHGIDRNLITDAHALMDDFFELPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQYSAEKKHLPNLVKDYLCSKLGKEFEQFGKVYETYCEAMSNLSLGIMELLGMSLGVGKSYFREFFEENNSIMRLNYYPPCQKPDLALGTGPHCDPTSLTILHQDQVGGLQVYVDDQWHSVTPNFNSFVVNIGDTFMALSNGRYKSCLHRAVVNSKTTRKSLAFFLCPTSDKLVTPPCELVDNLSSRLYPDFTWSMLLEFTQKHYRADIRTLDEFTKWLQRKDDKII* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4484 378 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 160 IPR026992 -
Amo19g4484 378 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 219 319 IPR005123 -
Amo19g4484 378 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 18 371 - -
Amo19g4484 378 Gene3D - 27 357 IPR027443 -
Amo19g4484 378 Pfam 2OG-Fe(II) oxygenase superfamily 221 319 IPR044861 -
Amo19g4484 378 PRINTS Isopenicillin N synthase signature 79 96 - -
Amo19g4484 378 PRINTS Isopenicillin N synthase signature 244 265 - -
Amo19g4484 378 PRINTS Isopenicillin N synthase signature 279 305 - -
Amo19g4484 378 SUPERFAMILY Clavaminate synthase-like 28 359 - -
Amo19g4484 378 PANTHER GIBBERELLIN 20 OXIDASE 3 18 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4484 Amo-Chr19 161875907 161877825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4484 38 357 Glycosyltransferase AT5G59530 26.970 1.50e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4484 K05282 - gmx:100816992 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4484 19 161875907 161877825 Amo19g4484 19 161875907 161877825 ECH
Amo19g4484 19 161875907 161877825 Amo19g4484 19 161875907 161877825 PCT