Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4465 ATGATGAGGATGAGGAACATGACCAATAATTATGGGGTCTCCGCCGTGAATAATGGAAGCGAGGCTACAACAACGAGGGCAATGGAATGGGAGATGAGACCAGGTGGAATGCTGGTTCAGCGCAGAACCGATGACTCGGATCGGAACTCAGTGCCGCCGGCACCGACAATTAGAGTTAGGGTTAAATACGGATCAACCTACCATGAAGTCAACATTAGTTCTCAAGCTACATTTGGGGAATTGAAGAAAATGTTGTCTGGTCCAACTGGGTTGCACCACCAGGATCAGAAGATATATTACAAGGACAAAGAGAGGGATTCAAAGGCGTTCCTTGACATTGTTGGAGTGAAGGACAAGTCCAAATTGGTGTTGGTGGAGGACCCTCTTAGCCAAGAGAGAAGGTACTTGGAGATGAGAAAGAATGCTAAGATGGAAAAAGCTGCCAAGTCCATTTCTGAAATCAGCTTGGAAGTTGATAGACTTGCAGCCAGGGTGTCAGCACTGGAATCAATTATTAGTAAAGGTGGCAAAGTTGCTGAAATTGATGTCATTAGTCTCATTGAGCTCTTGATGAATCAACTCCTTAAATTGGATGGTATAATGGCTGATGGAGATGTTAAACTGCAGAGGAAAATGCAGGTAAAAAGAGTTCAAAAGTATGTTGAAACTCTTGATATGCTTAAAATTAAGAATTCTATGGGCAATGCCAACAATGGAGGGCATCATGCATCAGTGAAGGCCCAACAAAGGCATTCAAATGTGCATAGACTAGCAACAATTCAAGAGCAACCACAATCACAAGGTGTGTCAAATGGGAATAATCATAGATCAGCAACAATTCAGGAGCAGCAGCAGCAGCAAAACCAGCACTCAGAAGTAGTAGTTACCACAAAATGGGAGACATTTGATTCTCTGCCACCGTTAATTCCAGTATCTTCTTCCACATCCACATCAGCAAGCCCACTGAATAATGGCAACAACAACAATAGTAATAACAATTCAGTTCATCACAAGTTCAATTGGGAATTCTTCGATTGA 1038 0.4258 MMRMRNMTNNYGVSAVNNGSEATTTRAMEWEMRPGGMLVQRRTDDSDRNSVPPAPTIRVRVKYGSTYHEVNISSQATFGELKKMLSGPTGLHHQDQKIYYKDKERDSKAFLDIVGVKDKSKLVLVEDPLSQERRYLEMRKNAKMEKAAKSISEISLEVDRLAARVSALESIISKGGKVAEIDVISLIELLMNQLLKLDGIMADGDVKLQRKMQVKRVQKYVETLDMLKIKNSMGNANNGGHHASVKAQQRHSNVHRLATIQEQPQSQGVSNGNNHRSATIQEQQQQQNQHSEVVVTTKWETFDSLPPLIPVSSSTSTSASPLNNGNNNNSNNNSVHHKFNWEFFD* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4465 345 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 1 1 320 - -
Amo19g4465 345 MobiDBLite consensus disorder prediction 261 292 - -
Amo19g4465 345 ProSiteProfiles Ubiquitin domain profile. 55 125 IPR000626 GO:0005515
Amo19g4465 345 CDD Ubl_AtBAG1_like 56 125 - -
Amo19g4465 345 MobiDBLite consensus disorder prediction 310 338 - -
Amo19g4465 345 Gene3D BAG domain 127 232 IPR036533 GO:0051087
Amo19g4465 345 SUPERFAMILY Ubiquitin-like 50 130 IPR029071 -
Amo19g4465 345 Pfam BAG domain 151 226 IPR003103 GO:0051087
Amo19g4465 345 ProSiteProfiles BAG domain profile. 150 228 IPR003103 GO:0051087
Amo19g4465 345 MobiDBLite consensus disorder prediction 310 345 - -
Amo19g4465 345 PANTHER BCL2-ASSOCIATED ATHANOGENE 1 320 IPR039773 GO:0051087
Amo19g4465 345 SUPERFAMILY BAG domain 110 232 IPR036533 GO:0051087
Amo19g4465 345 SMART BAG_1 150 228 IPR003103 GO:0051087
Amo19g4465 345 Gene3D - 56 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4465 Amo-Chr19 161602498 161605000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4465 - - mtr:MTR_1g101440 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4465 19 161602498 161605000 Amo19g4465 19 161602498 161605000 ECH