Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4461 ATGGAAAGCTACAAAGCAATGATAATACTTTTGGCAGTGATGTTAATTTCATATGTCCCATTTGCACCTGCAGTCATAGATTGCCCAATAGTGAACCAGCTATTCTCAGCATGCTCCATATTCATCACATATGGCTCGCCAGACCCCATGCCAGGAACACCATGTTGTGATGCAATGTCTGGATTGAACATCATTGCTAATGCTAACTCTGGTGACAATAGGCAATCTGTTTGTAGGTGCTTAATGGGCCTCATTGAAACCTACAACCCAAATGCCACTGCTATTGGTACCTTACCGGGCCTCTGTGGTGTCTCTTTGGGCTTCACCATTGATCCTAACACAAACTGCGGTTTCTAA 357 0.4398 MESYKAMIILLAVMLISYVPFAPAVIDCPIVNQLFSACSIFITYGSPDPMPGTPCCDAMSGLNIIANANSGDNRQSVCRCLMGLIETYNPNATAIGTLPGLCGVSLGFTIDPNTNCGF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4461 118 CDD nsLTP1 26 116 - -
Amo19g4461 118 Gene3D - 26 118 IPR036312 -
Amo19g4461 118 PANTHER - 1 116 IPR000528 GO:0006869|GO:0008289
Amo19g4461 118 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 14-RELATED 1 116 - -
Amo19g4461 118 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 117 IPR036312 -
Amo19g4461 118 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Amo19g4461 118 PRINTS Plant phospholipid transfer protein signature 107 118 IPR000528 GO:0006869|GO:0008289
Amo19g4461 118 PRINTS Plant phospholipid transfer protein signature 73 88 IPR000528 GO:0006869|GO:0008289
Amo19g4461 118 PRINTS Plant phospholipid transfer protein signature 89 106 IPR000528 GO:0006869|GO:0008289
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4461 7 116 Acyl Lipid Metabolism Gene Families AT5G01870 29.825 3.97e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4461 - - gmx:102665845 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4461 19 161576219 161576575 Amo19g4461 19 161576219 161576575 ECH