Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4460 ATGAGTAGTATGGGAGGGAGAGATCTTGAGAGTGGTGGAACCAAGAACACTTCTAGAGCTCCACCACAAGCAGCAGCAGTTTCTTCTTCTTCTTCATATGCTTATGATACAGAGACTCATTGGACATCATGGCTTGTGCCCATGTTTGTGGTTGCAAATATTGCTGTTTTCATCGTTGCCATGTACATCAACGACTGCCCCAAGAACAACATAGGACTCCAGGGTAATTGTGTCGCCAGGTTCCTTGGCAGGTTCTCTTTTCAGCCTCTTAGGGAGAATCCACTGCTTGGCCCTTCTTCTTCAACGTTGAGAAAGATGGGAGGTCTTGAGTGGGATAATGTTGTGAATAAGCATCAGGCATGGAGACTTGTCACTTGCATTTGGTTACATGCTGGAATTATTCATTTGCTAGCAAACATGTTGAGTCTGGTCTTCATTGGTATTCGCCTTGAGCAGCAATTTGGATTTGTGAGAATAGGAATCATATATCTAGTGTCTGGATTTGGGGGGAGTGTGCTGTCTACTCTGTTCATTAGAAACAACATTTCTGTTGGTGCATCTGGTGCTCTCTTTGGACTTCTTGGAGCAATGCTTTCGGAACTTTTCACAAACTGGACCATCTATTCAAATAAAGCAATGGCTTTGATCACACTTTTGGTTATCATTGTCATCAACCTTGCCCTTGGCATTTTGCCCCACGTTGATAATTTCGCTCACATCGGAGGATTCCTTACCGGATTCCTTCTCGGTTTCATTTTGCTGCCCCGTCCTCAGTTTGGTTGGTTAGAGCAGCGTCATCTTCCGGCGGGTGTTCGCCTCAAGTCCAAGTACAAGGCTTACCAGTATGTTCTATGGATACTCTCCCTCCTTCTCTTGATTGCTGGGTTATCAATTGCATTGGTGATGCTATTTCGGGGTGAAAATGGATATGATCACTGCCATTGGTGCCACTACCTTACATGCGTTCCAACTTCTAAATGGAAATGCAATGACACTTAA 999 0.4444 MSSMGGRDLESGGTKNTSRAPPQAAAVSSSSSYAYDTETHWTSWLVPMFVVANIAVFIVAMYINDCPKNNIGLQGNCVARFLGRFSFQPLRENPLLGPSSSTLRKMGGLEWDNVVNKHQAWRLVTCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSVLSTLFIRNNISVGASGALFGLLGAMLSELFTNWTIYSNKAMALITLLVIIVINLALGILPHVDNFAHIGGFLTGFLLGFILLPRPQFGWLEQRHLPAGVRLKSKYKAYQYVLWILSLLLLIAGLSIALVMLFRGENGYDHCHWCHYLTCVPTSKWKCNDT* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4460 332 MobiDBLite consensus disorder prediction 1 24 - -
Amo19g4460 332 SUPERFAMILY Rhomboid-like 41 258 IPR035952 -
Amo19g4460 332 Pfam Rhomboid family 115 257 IPR022764 GO:0004252|GO:0016021
Amo19g4460 332 Gene3D - 39 256 IPR035952 -
Amo19g4460 332 PANTHER RHOMBOID-LIKE PROTEIN 3 7 331 - -
Amo19g4460 332 PANTHER RHOMBOID-RELATED 7 331 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4460 Amo-Chr19 161573424 161575562 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4460 - - gmx:100813345 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4460 19 161573424 161575562 Amo19g4460 19 161573424 161575562 ECH