Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4443 ATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTGTTCAAACTCGAATTTCAGGCAACTCAGGTGCCAAAGATGAAGAAGTCTGCACTGATGGTATCTTTGGTTCCAGATGATGTTGGGAAACCAACTGTGAAACTGGAGAAAACTGAAGTTCAAGATGGGGCCTGCATATGGGAGAATCCAGTTTTTGAATCAGTTAAACTTGTTAGGGATGCTAAATCAGGAAAAATCCATGAGAAAATCTACCATTTCATTGTTTCCACTGGATCTTCAAAATCTGGCTTTCTTGGGGAAGCCTCAATTGATTTTGCTGATTTTGTAGCAGAAGCTGAGCCAATGACTGTCTCTCTACCCTTAAAATTCGCCAATTCCGGTGTAGTGTTACATGTGACAATTCAGAATGTGGAAGGATATACTGCTGAAAGAATTGGAGAAGATAATGGAGCTGAAGAACTTTATAATGACACAACCTTGAGACACCAACTGAGCTTTGGCAGTACAGAAGAAAGTTATAATGTTGAAGAAAATGGGAACATGGCCAAGACCAGATCTGGATATTCTGAACAAAATGCATCTAACGGCATTAGTCCTGGGGTAGCTTCATGGGAGGATCCTTATAGTTTCAGAAATACATCACTGCCATCATCAAAAGGAACTGGTGAGGCCACCGAGAACCAAGTGCACAAGAGGTCTAACACAAACTGGTCTCTTGGTTCAGGATCAGATGGAAGTTTAAACAGCCTTGAAGATAGTCTTCCAAGATTCCAAGGACATTCGGATAACACCATTGAAAAGCTCAAAAGTGAAATCACTTCTCTAAAGCGGCAAGCTGAAGTATCAGACTTAGAGTTACAATCGCTTCGAAAGCAGATAGAAAAAGAAAGCACTCGGGGACAAAATCTGTCGAGACAAATTATCAGTCTCAGAGAGGAGAGAGATGTGTTCAAACTTAAGTATGAGAAGCTCCAGTCCCAGCAGAGTTACAATGATGAGAGCAAAGCTTCAAGAGCCTTGAAGTCTGAGATTGAAGATACTAGGATTCAGTTAGAGGCAGTTAAGGAAGAGCTTGTTTATGAGAAAGAAACGAGTGCCAATCTTCAGTTGCAACTGCACAAGACACAGAGCTCAAACTCGGAACTACTTTTGGCTGTGACAGACCTTGAAGCAATGCTGGAACAAAAGAATAAGGAAATGTCAGATCTTTCTACCAATGTGAAATCCCAAAACAGTACTAGTCAGCGTGGTCATGCTAGAGAATTAGATTTCTTGAGGCAGAAAATTGAAGATCAGAATGGCGAAATAAACATGTACTGCAAGCAAAATGAAGAGCTAAACGAGCATATAAAAGAGCTCACTTTGGAGTATGACCTTCTTAAGAAGGAAAATGTTGATATCACTTTGAGATTGAAGCAAGATGAAGTTCAGCACCTTAAGTTACAAAATGAACATTCAGCTTCTTTGGCTACAATACAACTCCTCGAATCACAAGTAGAAAGACTAGAAGAAAGGATAAAGATGCTGGAAGATGAACATTCAACATCATTGGTCTACATCAAGGAACTTGAAAATGAAGTTAAGTCTTTGGAGAAAGAACTGAAAATGCAGGAAGAGAAATTTGAAGACGATATGCGTGCTATCCAACGTGCGAAAGCTGAGCAGGAAGAACGAGCCAGCCAAGCCGAAGAGGCCTTGAAAAAGACAAGACACAATAATGCTGTTGCTTCAGAGCGGTTTCAGGAGGAATATAGATTGCTTTCTGTTGAAATGGCGGCCAAAGTTGAGGAGAATGAAAAGATGAATGACAAAGCAGCTGCTGAAGCTGATGAATTGCGGCAGAAGAACAGACTTATAGAAGAAATGCTCCAGAAATGCAACCAAGAGCTCAGGCTAATTTCAGATCAGCACGAATTGAAACAGCAAGAGCTATTGAAGCAGATAGATTCAAAAGGAAAAGCAATGGAACACATGTCACATGAATTAGAAGTTAAATCCAAACAACTTGAAGAAGCAAAAAGGCAAAGGGATGAAAAGGAGGCTGCATTTTCAAAGCAAATTCAGTTGCTTAGATCTCAGATTAAAACATTGTTGGCAGAGGAGTGCACATTGTCTAAATCCAAGCTAAAAAAGAACACAGCTGAGATGGTAAGGATAGATGCACAAACAACAAATGATGAGGAGATGGTGCTCAGCACCCTACTGTCAGAAGTGGAAATCTTTAAGGTGCAGCACAATGAAACAAAACAAAGTTTGCACAAAGAACAAGTGGAGAAAGAATGTATGAAGAAACAGATATCTCAATTAGAAGGAGAGTTGAAGAAGAAGGAAGCGGAGTTAAGTGCTATGGAGAAGAAGATCAGGAATAACAAAGGACGAGATTATGCCGCACCTCTTTCTTCTGCTAAGGCCCAGATTAAGAAATCAAAACCAGAAATTGAGAAGGGAACGGATGCGGGAAGCAAATCAGCTAAGAACCAAGATAGCGAGGTCCGAATGCATGAACTGTTGAATGAAGTATCAGCCCTTAAGGAAAAGAACAAGAACATGGAAAGCGAGCTGAAAGAAATGGAAGATAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTTGAGGGAGAAAGACAGCAGCTCGTTATGGCGGTACGCAATCTCAAGAATGGTAAGAAGAACTAG 2676 0.4047 MFKSWSKKNKIKAVFKLEFQATQVPKMKKSALMVSLVPDDVGKPTVKLEKTEVQDGACIWENPVFESVKLVRDAKSGKIHEKIYHFIVSTGSSKSGFLGEASIDFADFVAEAEPMTVSLPLKFANSGVVLHVTIQNVEGYTAERIGEDNGAEELYNDTTLRHQLSFGSTEESYNVEENGNMAKTRSGYSEQNASNGISPGVASWEDPYSFRNTSLPSSKGTGEATENQVHKRSNTNWSLGSGSDGSLNSLEDSLPRFQGHSDNTIEKLKSEITSLKRQAEVSDLELQSLRKQIEKESTRGQNLSRQIISLREERDVFKLKYEKLQSQQSYNDESKASRALKSEIEDTRIQLEAVKEELVYEKETSANLQLQLHKTQSSNSELLLAVTDLEAMLEQKNKEMSDLSTNVKSQNSTSQRGHARELDFLRQKIEDQNGEINMYCKQNEELNEHIKELTLEYDLLKKENVDITLRLKQDEVQHLKLQNEHSASLATIQLLESQVERLEERIKMLEDEHSTSLVYIKELENEVKSLEKELKMQEEKFEDDMRAIQRAKAEQEERASQAEEALKKTRHNNAVASERFQEEYRLLSVEMAAKVEENEKMNDKAAAEADELRQKNRLIEEMLQKCNQELRLISDQHELKQQELLKQIDSKGKAMEHMSHELEVKSKQLEEAKRQRDEKEAAFSKQIQLLRSQIKTLLAEECTLSKSKLKKNTAEMVRIDAQTTNDEEMVLSTLLSEVEIFKVQHNETKQSLHKEQVEKECMKKQISQLEGELKKKEAELSAMEKKIRNNKGRDYAAPLSSAKAQIKKSKPEIEKGTDAGSKSAKNQDSEVRMHELLNEVSALKEKNKNMESELKEMEDRYSEISLKFAEVEGERQQLVMAVRNLKNGKKN* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4443 891 Coils Coil 655 689 - -
Amo19g4443 891 MobiDBLite consensus disorder prediction 797 831 - -
Amo19g4443 891 Gene3D - 413 584 - -
Amo19g4443 891 Coils Coil 826 874 - -
Amo19g4443 891 Coils Coil 520 579 - -
Amo19g4443 891 MobiDBLite consensus disorder prediction 185 262 - -
Amo19g4443 891 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 891 - -
Amo19g4443 891 MobiDBLite consensus disorder prediction 807 831 - -
Amo19g4443 891 PANTHER BNAC08G20130D PROTEIN 1 891 - -
Amo19g4443 891 Coils Coil 485 512 - -
Amo19g4443 891 MobiDBLite consensus disorder prediction 207 260 - -
Amo19g4443 891 Coils Coil 337 357 - -
Amo19g4443 891 Coils Coil 379 413 - -
Amo19g4443 891 Coils Coil 422 470 - -
Amo19g4443 891 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Amo19g4443 891 Coils Coil 595 643 - -
Amo19g4443 891 Coils Coil 752 793 - -
Amo19g4443 891 Coils Coil 265 327 - -
Amo19g4443 891 MobiDBLite consensus disorder prediction 185 199 - -
Amo19g4443 891 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4443 Amo-Chr19 161439632 161444399 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4443 - - gmx:100806603 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4443 19 161439632 161444399 Amo19g4443 19 161439632 161444399 ECH