Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4439 GAGGCTTTCTCCATCAACGACGACATCATGGCGAACGCGGCATCTGGAATGGCTGTTAATGATGCATGTAAATTGAAGTTTCTGGAGTTAAAGGCAAAGAGGAATTACCGATTCATTGTGTTCAGGATTGAGAACCAAGAAGTGGTGGTGGAGAAAGTCGGAAGCCCCGACGAAACCTATGATGACTTCACTGCTTCTCTACCTGCTAATGAGTGCCGATATGCTGTCTTTGATTTCGATTTCACTACGGACGAGAACTGTCAGAAAAGCAAAATTTTCTTCATTGCATGGGCACCGGATACATCAAGAGTGAGAGAAAAGATGGTGTATGCGAGCTCCAAGGATAGATTCAAGAGGGAACTCGATGGCATTCAAGTTGAATTGCAAGCAACGGATCCAAGTGAGATGAGCTTTGACATCATAAAAGCCCGGGCAATATAA 441 0.4444 EAFSINDDIMANAASGMAVNDACKLKFLELKAKRNYRFIVFRIENQEVVVEKVGSPDETYDDFTASLPANECRYAVFDFDFTTDENCQKSKIFFIAWAPDTSRVREKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4439 146 CDD ADF_cofilin_like 15 145 IPR017904 GO:0015629|GO:0030042
Amo19g4439 146 PANTHER COFILIN-RELATED 9 146 IPR017904 GO:0015629|GO:0030042
Amo19g4439 146 Pfam Cofilin/tropomyosin-type actin-binding protein 23 143 IPR002108 GO:0003779
Amo19g4439 146 ProSiteProfiles ADF-H domain profile. 16 146 IPR002108 GO:0003779
Amo19g4439 146 SMART adf_2 21 146 IPR002108 GO:0003779
Amo19g4439 146 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 9 146 - -
Amo19g4439 146 Gene3D Severin 5 146 IPR029006 -
Amo19g4439 146 SUPERFAMILY Actin depolymerizing proteins 6 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4439 Amo-Chr19 161429046 161430017 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4439 K05765 - ahf:112779196 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4439 19 161429046 161430017 Amo19g4439 19 161429046 161430017 ECH