Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4433 ATGGAGTCCCTTTGGAAACTCGTGTATCTGCTGGAGCCCGCACCTGTCACCCTCATAACTACAGCTGTAGCTGTGACATTTGCATCTGCTTTTCGAGCTCTAAATTACGGGAAAGAAATGGAGCGSAATCGCGACTTATCYGAAGCATCRATTACACTGGATAGGTCACAAGCATTGATGATACCAGTGATGAGCTCTTTCAGCTTGCTTTTGATGTTCTACTTGTTCTCGTCTGTGTCACAGCTTCTCACAGWGTTCACTGCAGTTGCTTCTGCATCATCCCTTTACTTCTGCTTGTCTCCTTATGTTGCCTATTTGAAGTCACAGTTTGGTTTAGCTGATCCTTTTGTGTCACGCTGTTGCTCAAAATCTTTTACACGAATCCAAGGGCTGCTATTGATATCATGCTCTGTCGTGGTGGCTGCTTGGCTTGTCTCTGGTCATTGGATACTGAATAATTTACTAGGCATATCGATATGCATTGCTTTTGTAAGCCATGTGCGCCTCCCAAACATCAAGATTTGTGCAATGCTCCTTCTTTGTCTATTTGTCTATGACATTTTCTGGGTTTTCTTCTCTGAAAGATTTTTTGGGGCAAATGTCATGGTATCAGTCGCGACACAGCAAGCATCAAATCCTGTGCACACGGTTGCTAATAGTTTGAGTCTTCCTGGGTTGCAACTGATAACAAAGAAATTGGAGTTGCCCGTAAAGATTGTATTTCCCAGAAATTTGTTGGGTGGTGTTGTTCCTGGAGAGAGTGCAACAGATTTTATGATGCTTGGTTTAGGAGACATGGCTATCCCTGGAATGCTCCTGGCTTTAGTTCTCTGCTTTGATTATCGAAAGAGCCGGGATACAGTAAATCTCTTTGAGTTACATTCTTCGAAAGGGCACAAATATATTTGGTATGCATTGCCTGGTTATGCAATTGGTCTGGTGACTGCTTTGGCAGCTGGTGTCTTGACCCACTCTCCTCAACCTGCACTTTTATATCTGGTGCCTTCTACCCTGGGACCCGTAATCGCCATCTCTTGGATTAAAAAGGAGCTACTTGAGTTGTGGGAAGGAAACATGCCAAATTTCAACGATAAGGATCGCGAAATAGAAGTTTAG 1116 0.4346 MESLWKLVYLLEPAPVTLITTAVAVTFASAFRALNYGKEMERNRDLSEASITLDRSQALMIPVMSSFSLLLMFYLFSSVSQLLTXFTAVASASSLYFCLSPYVAYLKSQFGLADPFVSRCCSKSFTRIQGLLLISCSVVVAAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLLCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIVFPRNLLGGVVPGESATDFMMLGLGDMAIPGMLLALVLCFDYRKSRDTVNLFELHSSKGHKYIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIKKELLELWEGNMPNFNDKDREIEV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4433 371 Pfam Signal peptide peptidase 49 358 IPR007369 GO:0004190|GO:0016021
Amo19g4433 371 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 3 4 359 - -
Amo19g4433 371 PANTHER SIGNAL PEPTIDE PEPTIDASE 4 359 IPR007369 GO:0004190|GO:0016021
Amo19g4433 371 SMART psh_8 49 348 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4433 Amo-Chr19 161365171 161368338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4433 K09598 - gmx:100794976 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4433 19 161365171 161368338 Amo19g4433 19 161365171 161368338 ECH
Amo19g4433 19 161365171 161368338 Amo09g2823 09 107254169 107257244 hybridization