Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4281 ATGGATAAGACGAAGATTGAGGAGGTGATAGAGAAGCAAGTGCTGACGGTGGTGCAGGCCGTTGAGGACAAGATCGACGATGAGATCGCCGCCCTCGACCGCCTAGACGCTGATGACCTAGAAGCCCTGAGAGAGCGCCGCCTCCAACAGATGAAGAAGATGGCCGAGAAGCGWAGCCGTTGGATCTCCCTCGGACACGGCGAATACACCGAGATCCCTTCWGAYAAGGACTTCTTCTCCGTCGTCAAGGCCAGCGAGCGCGTCGTCTGCCATTTCTACCGCGAAAACTGGCCCTGCAAGGTGGTTGATAAACATTTGAGTATATTGGCAAAGCAGCATATCGAGACTCGTTTTGTGAAAATTAATGCTGAAAAGAGTCCTTTTTTGGCTGAGAAGCTCAAGATCATTGTTCTTCCAACTCTTGCCCTCATTAAGAATGCCAAAGTGGATGACTATGTGGTGGGATTCGATGAACTTGGTGGGACTGATGAATTTAGCACAGAGGATTTGGAAGAGAGATTGGCTAAAGCTCAAGTAATCTTTTTTGAGGGTGAATCTTCATCAAGGTCAAGTGCGCAAACTAAAAGAAGTGTTCGGCAGAGCTCAACAGCAGACTCATCGGATTCCGAATGA 633 0.4866 MDKTKIEEVIEKQVLTVVQAVEDKIDDEIAALDRLDADDLEALRERRLQQMKKMAEKRSRWISLGHGEYTEIPSDKDFFSVVKASERVVCHFYRENWPCKVVDKHLSILAKQHIETRFVKINAEKSPFLAEKLKIIVLPTLALIKNAKVDDYVVGFDELGGTDEFSTEDLEERLAKAQVIFFEGESSSRSSAQTKRSVRQSSTADSSDSE* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4281 210 SUPERFAMILY Thioredoxin-like 5 177 IPR036249 -
Amo19g4281 210 Coils Coil 18 60 - -
Amo19g4281 210 CDD Phd_like_TxnDC9 65 175 - -
Amo19g4281 210 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 210 - -
Amo19g4281 210 MobiDBLite consensus disorder prediction 184 210 - -
Amo19g4281 210 Pfam Thioredoxin 74 156 IPR013766 -
Amo19g4281 210 Gene3D Glutaredoxin 48 181 - -
Amo19g4281 210 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4281 Amo-Chr19 159510764 159513175 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4281 - - gmx:100814116 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4281 19 159510764 159513175 Amo19g4281 19 159510764 159513175 ECH