Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4271 ATGGCGTCCTTCACTCCCTTCTCACTATTATTTCTGCTGCTTCTCCAAAATCCCTTCCTATCTCTCTCATCCAACTCCGAAGGGAATGCACTGCATGCTCTGAGAAGCAGGCTTTCTGACCCAAACAACGTGCTTCAGAGCTGGGACCCAACCCTGGTTAATCCCTGTACTTGGTTCCATGTTACCTGTGACTCCAACAATCACGTTATTCGCTTAGACTTGGGCAATTCTAACATTTCTGGAACTCTGGGCCCAGAACTTGGCCAGTTACACCATCTCCAGTACCTGGAACTCTATAGGAATGAATTATCAGGAAAGATTCCTGAGGAACTTGGCAAGTTGAAGAAACTTATTAGCATGGATTTGTATGGTAACAAATTGGAGGGGAGAATCCCAAAGTCATTTGGCAAGTTGAAGTCACTTAAATTCCTGCGGCTAAATGATAACAAGTTGTCAGGAACAATACCAAGAGAACTCACTCATCTTAAGAATCTCAAAATCTTTGATGTCTCTAATAATGACCTCTGTGGAACAATACCAGTAGATGGCAACTTCGGATCTTTCCCAATGGAAAGCTTTGAGAACAACAGACTTAATGGTCCTGAGCTGAAAGGACTAGTTCCCTATGATTTTGGATGCTGA 642 0.4315 MASFTPFSLLFLLLLQNPFLSLSSNSEGNALHALRSRLSDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGTLGPELGQLHHLQYLELYRNELSGKIPEELGKLKKLISMDLYGNKLEGRIPKSFGKLKSLKFLRLNDNKLSGTIPRELTHLKNLKIFDVSNNDLCGTIPVDGNFGSFPMESFENNRLNGPELKGLVPYDFGC* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4271 213 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 10 210 - -
Amo19g4271 213 Pfam Leucine rich repeat 120 175 IPR001611 GO:0005515
Amo19g4271 213 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 10 210 - -
Amo19g4271 213 SUPERFAMILY L domain-like 24 201 - -
Amo19g4271 213 Gene3D Ribonuclease Inhibitor 23 205 IPR032675 -
Amo19g4271 213 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4271 Amo-Chr19 159399105 159401745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4271 2 201 Receptor kinase-like Gene Family AT1G71830 58.416 5.41e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4271 - - gmx:100816279 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4271 19 159399105 159401745 Amo19g4271 19 159399105 159401745 ECH