Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4269 ATGACGATATCCAAAAGGAAGTACACTCGAATCGACACTTTGGAGCTGAAGGCACTACTTGGCCGGAGGGTTGGTCATCAGAGAGCTGACAAGTACTTTGATCAACTCAGAAGATTGTTCAGTTCAAAGATCAGCAAATCAGAGTTCGACAGGGTTTGCATCATGGTCATTGGGAGAGAAAACATCCCTCTTCACAACCAGTTCATTAGGGCAATTCTCAAGAATGCTTGTCTTGCCAAATTCCCGCCGCCGCCGAAGCCGAGAGGTTCTGCCAGACTGGGAAGTGTTTCCAGTGTGGAAGTTTCTAATGGGAGGCAAAGCAGCTCTATCCTAACACCATCAGGGGATGCATTATCCCGGTTAGCTGCACAAGATCTCAAGTTCAAAGCCCGCCAAAATTCTCTTGGCAAGCAACAAAGTCTGGCATCTGATGAATTTGCCTTCAAGACACAAGAGCAGCAGAGTGCAACTGAACTGAATTCCCTCGACAGTAGAGCTCCTGTTTCTGTTGAAGATGGAGAAGAAGTTAGACAAACGGCTGGAAGCCCCGGCATCCAAAGCAGGAGCCCAGTTACAGCACCCCTTGGTATATCCATGAATTTAGGTTGCAATCGGAAGCTTGCATCAAATGTATCTTTATGTAGTAAATATTATCCCGAGACCTGTCACAGCATGGGAGATCTCCCCGACACGAGATCTTTGAGGAGTCGGTTAGAGCAGAAGTTGGAGAAGGAAGGTTTAACTGTCACAGTGGATTGTGTAAATCTTTTGAATAATGCATTGGATTCATATATGAAGAGGTTGATTGAATCTTCCCTGGTTTTAGCTGGGTCAAGAGTTGGAAACGAGCAAATAAGGCTGCCGAGTCGACAGCTGATTAATTCAAACGGAATGCTACCAAGAAGGTACATGCAAACAGCACCTAGATTGGCCAAAGCATCAATCTTGGATTTTTGTCTTGCGATGGAGCTAAATCCGCAAGTTCTTGGACCAGATTGGCCGATGCAGCTTGAGAGGATTTCCATACGTGCTTCTGAAGAATGA 1044 0.4579 MTISKRKYTRIDTLELKALLGRRVGHQRADKYFDQLRRLFSSKISKSEFDRVCIMVIGRENIPLHNQFIRAILKNACLAKFPPPPKPRGSARLGSVSSVEVSNGRQSSSILTPSGDALSRLAAQDLKFKARQNSLGKQQSLASDEFAFKTQEQQSATELNSLDSRAPVSVEDGEEVRQTAGSPGIQSRSPVTAPLGISMNLGCNRKLASNVSLCSKYYPETCHSMGDLPDTRSLRSRLEQKLEKEGLTVTVDCVNLLNNALDSYMKRLIESSLVLAGSRVGNEQIRLPSRQLINSNGMLPRRYMQTAPRLAKASILDFCLAMELNPQVLGPDWPMQLERISIRASEE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4269 347 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 8 273 IPR024738 GO:0070461
Amo19g4269 347 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 347 - -
Amo19g4269 347 MobiDBLite consensus disorder prediction 84 113 - -
Amo19g4269 347 MobiDBLite consensus disorder prediction 152 172 - -
Amo19g4269 347 MobiDBLite consensus disorder prediction 95 113 - -
Amo19g4269 347 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 347 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4269 Amo-Chr19 159393429 159394472 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4269 - - gmx:100817344 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4269 19 159393429 159394472 Amo19g4269 19 159393429 159394472 ECH