Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4268 ATGGTGGCTGCCATTTCTGAAACTGCAGCAGCTTCAACCGACCCATTACCCTCGAAATCCACCAATGGCACCACCACCACCACCTCTACCATACCTAGAAGACCCAAGGGGAGGCAAGTTTCTTCAAGGTACATGTCTCCTTCACCCTCCACCTCCACCACCACCACTTCAACCTCAACTACTTCAACTTCTTCATCTTCCACTTCTTCTAGAAGGTTCCCTTCTCCTCTACTCTCTCGCTCAACCAATTCGTCTCATCCTCCTTCAACTCCTCTCCTTCCCAACCGTTCCCAATCTGTGGGCCGACGCAGGCCCAGCAGGCCCATGACTCCGGTTCCCGACAATGCCGCTGCCGATGTCTCCTCCGCCGCCGCTAAGCTTCTTGTCAGTTCCACGCGGAGCCTCTCCGTTTCGTTCCAAGGGGAGGCGTTCTCGCTTCCGATCAGCAAGGCCAAGGCCTCCGCCACCGCCACGCCGCCTTCTTCCGGCAACTCCAGGAAGGCCGCTGCGACTCCGGAGCGGCGGAGGTCAACTCCCGTGAGAGGAGATCAAGGGGAAAATTCAAGGCCCGGAGATCAGCACCGGTGGCCGGGTCGGACCCGGAACCCGAACTCAGGTCCGAATAGCCTCTATAGGAGTGTGGATTGCACTGTTGGAAATGGGGCTGGGAAAGTGGTGCGTGCATTGCAGCAATCGATGGTTTTGGATGGTGGTGGCAGTAGAAGGGCTTCTTTTGGTGGTGGGGTTGCAGGGTTGAGTTTGGATTTGGGAAAAGCTGAGTTGTTGAAGAGTGACGATAATAAGCATAATAATCATCATCATGAGTCTCCATTGGTTCCTAGTGATCTCACTGCTTCTGCTTCTGATAGTGATAGTGTTTCCTCTGGTAGCACTTCAGGTGTGCAGGATTATCCTTCTGCTGCTGCTAAGCCTCGCGGCATTGTTGTTTCTGCCAAGTTTTGGCAGGAGACTAATAGCCGCCTGCGCCGCCTGCAGGATCCCGGTTCACCATTGTCAACAAGCCCTGTCTCTAGAATGGTTGGTACAGCAAAGAATTCTCAGTTGAGAAGGTATAATAGTGGTGGCCCTGTCTTGTCTCCAAGAACCATGGCTTCTCCTATCAGGGGTAATCCAGCGCGGCCTGCTTCACCAAGTAAACTTTGGGCATCTTCTACATCCTCGCCTTCGAGGGGGATTGCCAGTCCTGTTAGGGTCAGAAGTGCTGTTGCCAGCTCCATCAGTAGTAATTCTAGTAGTACACCTTCTATTCTCAGCTTCTCTGCTGATGTGAGAAGAGGGAAGATAGGGGAAGATCGGATATTCGATGCACATACATTGAGGCTTCTGTATAATCGCTATGCGCAGTGGCGGTTTGTTAATGCAAGGGCAGATGCTACCTTCATGGTTCAGAAACTGAGTGCAGAGAGGCATTTGTGGAATGCATGGGTTACAATTTCAGAACTTAGGCATTCAGTCATACTTAAAAGAATCAAGCTGGTGTTGCTGAGGCAAAAGTTGAAGCTAACTTCCATCCTAAAGGGACAGATTTCTTATTTGGAAGAATGGGCCCATCTAGATAGAGATCACGCCAATTCTTTGCTTGGAGCAACTGAAGCTTTGAAGGCCAGTACCCTCCGTCTTCCGGTTGTTGAAAAAGCAGTAGCGGATGTACCAAATCTAAAGGATGCTCTGGGGTCAGCAGTTGATGTGATGCAGGCAATGGCATCCTCTATATACTCTCTCTCATCAAAGGTGGAAGAAACTAACTGCTTGGTGGCGGAAATCGTGAAGGTGACCTCAAAGGAAAGGTTTTTGCTTGAGCAATGCAAGGACTTTTTGTCCTCATTAGCAGCCATGCAGGTGAAGGATTGTAGCTTAAGAACGCATATGTTACAACTATCTCGAGTACCAAGTTGCAGCTGCCTGACAACACATGTGTAG 1941 0.5059 MVAAISETAAASTDPLPSKSTNGTTTTTSTIPRRPKGRQVSSRYMSPSPSTSTTTTSTSTTSTSSSSTSSRRFPSPLLSRSTNSSHPPSTPLLPNRSQSVGRRRPSRPMTPVPDNAAADVSSAAAKLLVSSTRSLSVSFQGEAFSLPISKAKASATATPPSSGNSRKAAATPERRRSTPVRGDQGENSRPGDQHRWPGRTRNPNSGPNSLYRSVDCTVGNGAGKVVRALQQSMVLDGGGSRRASFGGGVAGLSLDLGKAELLKSDDNKHNNHHHESPLVPSDLTASASDSDSVSSGSTSGVQDYPSAAAKPRGIVVSAKFWQETNSRLRRLQDPGSPLSTSPVSRMVGTAKNSQLRRYNSGGPVLSPRTMASPIRGNPARPASPSKLWASSTSSPSRGIASPVRVRSAVASSISSNSSSTPSILSFSADVRRGKIGEDRIFDAHTLRLLYNRYAQWRFVNARADATFMVQKLSAERHLWNAWVTISELRHSVILKRIKLVLLRQKLKLTSILKGQISYLEEWAHLDRDHANSLLGATEALKASTLRLPVVEKAVADVPNLKDALGSAVDVMQAMASSIYSLSSKVEETNCLVAEIVKVTSKERFLLEQCKDFLSSLAAMQVKDCSLRTHMLQLSRVPSCSCLTTHV* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4268 646 Pfam QWRF family 292 607 IPR007573 -
Amo19g4268 646 MobiDBLite consensus disorder prediction 327 401 - -
Amo19g4268 646 MobiDBLite consensus disorder prediction 169 196 - -
Amo19g4268 646 MobiDBLite consensus disorder prediction 281 304 - -
Amo19g4268 646 MobiDBLite consensus disorder prediction 153 168 - -
Amo19g4268 646 MobiDBLite consensus disorder prediction 327 360 - -
Amo19g4268 646 MobiDBLite consensus disorder prediction 11 104 - -
Amo19g4268 646 MobiDBLite consensus disorder prediction 153 215 - -
Amo19g4268 646 MobiDBLite consensus disorder prediction 384 400 - -
Amo19g4268 646 MobiDBLite consensus disorder prediction 264 305 - -
Amo19g4268 646 MobiDBLite consensus disorder prediction 1 117 - -
Amo19g4268 646 PANTHER QWRF MOTIF-CONTAINING PROTEIN 2 31 644 - -
Amo19g4268 646 MobiDBLite consensus disorder prediction 198 215 - -
Amo19g4268 646 PANTHER AUGMIN FAMILY MEMBER 31 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4268 Amo-Chr19 159365606 159371226 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4268 - - adu:107467506 1096.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4268 19 159365606 159371226 Amo19g4268 19 159365606 159371226 ECH