Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4266 ATGAAGTTCATGAAACTTGGTTCTAAGCCAGATACCTTTCAGACTGATGGGAACAATGTCAGGTATGTGGCCAGTGAGTTGGTATCAGATATCATTGTTAGTGTTGGGGATGTAAAGTTTTATTTACATAAGTTCCCTCTTCTATCAAAGAGTGCTCGCTTACAGAAGATGATCTCCCTCAGTAATGAAGAAAATGTAGATGATGTCCAAATTGGTGACATTCCGGGAGGCGCAAGTGCCTTCGAGATATGTGCTAAGTTCTGCTATGGGATGACTGTTACCCTGAATGCTTACAATGTAATAGCAACTCGGTGTGCAGCAGAGTACCTTGGAATGCATGAGACAATTGAGAAAGGAAACCTCATTTACAAGATTGATGTTTTCCTTAGCTCTAGCATTTTCCGTAGTTGGAAGGATTCGATCATACTTCTTCAGACTTCAAAGTCTATGCTACCATTGGCTGAGGACTTAAAGGTGGTGAGCCATTGCATTGAATCTATAGCCAACAAGGCATGTGTTGATGTATCAAAAGTTGACTGGTCTTACTCCTACAACCGGAGAAAGCTTCCGGAGGAAAATGGAATCGATTCAGATCCGAACGAAATCAGAACTCGGCTAGTACCAAAAGACTGGTGGGTTGAAGATCTATGTGAGCTTGAAGTTGATTTGTACAAGTCTGTAATTACAAGTATTAAAAGCAAGGGAGTTCAGCCTAATGAGGTAATTGGTGAAGCTTTGAAAGCTTATGCTTACAGAAGATTACCAAGTTTCACCAAGGGAATGATCCCCTGTGGAGACATATCAAAGCAACGGCTAATAGTCGAAACAATCCTATGGTTGTTACCTACTGAGAAAGGCAGCATCTCTTGTAGGTTCTTACTCAAGTTGTTAAAAGCTGCCATTTTCGTAGAGTTAGGAGATAAGGCTAAAGAAGAGCTTGTAAGGAGAATTGGGCAGCAACTGGAGGAGGCTTCTGTTAGTGATATTTTGATTCGAGCACCGGATAGAGAAACTACAATCTATGATGTCAGTATAGTCCAGAAAATTTTAAGAGAGTTCTTCATGAAAAATCACAACACTGAGATTGAATCAATAGGTGCTGGTGAGCTTGTGGGGATAAGAAATCCCGGGATTTTATCTGATGCTTCCAAGCTTATGGTTGCAAAACTCATAGATGGATACCTTGCCGAAGTTGCAAAGGATCCCAATTTACCTTTGTCAGATTTTGTTGATCTTGCTGATCTAGTGTCGAGCATCTCTCGTCCTACTCACGATGGCCTTTACAGGGCCATCGACACGTATCTTAAGGAGCACCCTGGGATCAGCAAAGGTGACAAAAAGAGGATTTGCAAACTAATGGATTGCAGAAAACTGTCTGTTGATGCCTGCATGCATGCAGTGCAAAATGAGAGGCTACCATTGCGAGTTGTTGTGCAGGTACTTTACTTTGAGCAGGTAAGGAGTGCTGCATCATCCGGTACCAGCACGCCCGACATACCTAAAGGACACAAGGATTTGAGCAATGTATCTAACGCTAGCTCGAGGTCCGGGACAACCAATCCGGAAGACGAATTGGATGCTGTGGCCACAGCTGAGGAGCTGAAGGCATTAAGAAGGGAACTTGCATCATTGAGGATGAGCAATGGTGGTGGTGGTGGTAATGAGAAAGATGTAGATATCAAACCAAACATGGACAAAGCTGTGATTGGAAAGATGAAAGGGTTGCTCAGGTCAAAGAAGTCATTCATAAAGAAATGGGCCAGCAAAGGAGGACAAGGTGAAAATAGTGGCTCTGATTCATCAGATAGTATTGGTTCTGCTAATCCAGAAGAAGTTAAATCCACTCCACTAAGGTACATATAG 1863 0.4251 MKFMKLGSKPDTFQTDGNNVRYVASELVSDIIVSVGDVKFYLHKFPLLSKSARLQKMISLSNEENVDDVQIGDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHETIEKGNLIYKIDVFLSSSIFRSWKDSIILLQTSKSMLPLAEDLKVVSHCIESIANKACVDVSKVDWSYSYNRRKLPEENGIDSDPNEIRTRLVPKDWWVEDLCELEVDLYKSVITSIKSKGVQPNEVIGEALKAYAYRRLPSFTKGMIPCGDISKQRLIVETILWLLPTEKGSISCRFLLKLLKAAIFVELGDKAKEELVRRIGQQLEEASVSDILIRAPDRETTIYDVSIVQKILREFFMKNHNTEIESIGAGELVGIRNPGILSDASKLMVAKLIDGYLAEVAKDPNLPLSDFVDLADLVSSISRPTHDGLYRAIDTYLKEHPGISKGDKKRICKLMDCRKLSVDACMHAVQNERLPLRVVVQVLYFEQVRSAASSGTSTPDIPKGHKDLSNVSNASSRSGTTNPEDELDAVATAEELKALRRELASLRMSNGGGGGNEKDVDIKPNMDKAVIGKMKGLLRSKKSFIKKWASKGGQGENSGSDSSDSIGSANPEEVKSTPLRYI* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4266 620 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 1 618 IPR029960 GO:0009958
Amo19g4266 620 MobiDBLite consensus disorder prediction 491 525 - -
Amo19g4266 620 Gene3D Potassium Channel Kv1.1; Chain A 8 121 IPR011333 -
Amo19g4266 620 SUPERFAMILY POZ domain 21 117 IPR011333 -
Amo19g4266 620 CDD BTB_POZ_NPY3-like 20 124 - -
Amo19g4266 620 MobiDBLite consensus disorder prediction 506 523 - -
Amo19g4266 620 MobiDBLite consensus disorder prediction 586 620 - -
Amo19g4266 620 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Amo19g4266 620 Pfam NPH3 family 210 463 IPR027356 -
Amo19g4266 620 Pfam BTB/POZ domain 25 118 IPR000210 GO:0005515
Amo19g4266 620 PANTHER OS12G0117600 PROTEIN 1 618 IPR043454 -
Amo19g4266 620 Coils Coil 527 547 - -
Amo19g4266 620 MobiDBLite consensus disorder prediction 591 610 - -
Amo19g4266 620 ProSiteProfiles NPH3 domain profile. 210 487 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4266 Amo-Chr19 159356691 159360336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4266 8 503 EF-hand Containing Proteins AT3G44820 36.158 1.52e-102 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4266 - - gmx:100807318 1045.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4266 19 159356691 159360336 Amo19g4266 19 159356691 159360336 ECH