Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4256 ATGAAGCAGTGTGTGGCAGAAACACCAAGAGCACAGTATCGTGGGGGCATTATAATAAATCCAGGATTTGATCACAGCATAGATGTGACAGTGTCAGTTATATTTAAAACGAATGCAACTGAGCTGATTCGAGGAGGCCACGTGGTAGCAAAGCATGGATGCTGGACTCAGCTAAAAGGTGGCATAGTTGCCAACTACTCAAGCCCTGCTGAGATTCTTTTTGAGACCAAGAACTCAAAGCTGGAAATATGGGCTGATAGTGTTTCCTTGCAACCATTCACCAAAGAGCAATGGAGATCACATCAAGATGAAAGCATCGAGAGGAATCTGCACTTCAGCTTCTTTGAGGACAATCTTGGTGAAAATGCTTCTGCAAAGTATTTTTCTAAAACTTACCAGCTTGATCCAAAACCATTATTGTTCATGAACGAGTATAACACTATTGAATATAGTGGTGATAGAGCTTCCTGCCCAGCCAATTATATTGCGAAAATGGCGAAGATTCGGTCATTTCCAGGAAATGAAGGAATATCAGCAGCAATAGGGCTGCAAGGCCATTTCACTGCTGGCCAGCCAAATCTTACTTACATGAGAGCTGCTCTTGATGCTTTTGATACTACTTCACTTCCAATATGGCTCACAGAAGTGAGGATCATCATGTTTGTTGGTCCGGCAATAGCTGCAGGTTTCAAGGACATGGCTCTCACTGATGAGAATTTTCAGAATACTCTGGTCAGTGACGTTGTGGACAAGCTCATCAGTGAGTGGCAAACTGAGCCTCAGAAAGCCATAGCAGACAGCACTGGATTTATACATTTTTCACTGCATCATGGAGAGTATGATGTAACTGTGACACATCCTCTTGGCCACTCCTCAAAAACACTGAATCTAAGTGTAAGAAAAGATTCTACACAACAAACCATCCATGTCAAAATGCATTCATAA 945 0.4233 MKQCVAETPRAQYRGGIIINPGFDHSIDVTVSVIFKTNATELIRGGHVVAKHGCWTQLKGGIVANYSSPAEILFETKNSKLEIWADSVSLQPFTKEQWRSHQDESIERNLHFSFFEDNLGENASAKYFSKTYQLDPKPLLFMNEYNTIEYSGDRASCPANYIAKMAKIRSFPGNEGISAAIGLQGHFTAGQPNLTYMRAALDAFDTTSLPIWLTEVRIIMFVGPAIAAGFKDMALTDENFQNTLVSDVVDKLISEWQTEPQKAIADSTGFIHFSLHHGEYDVTVTHPLGHSSKTLNLSVRKDSTQQTIHVKMHS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4256 314 Pfam Glycosyl hydrolase family 10 109 218 IPR001000 GO:0004553|GO:0005975
Amo19g4256 314 PANTHER GLYCOSYL HYDROLASE 108 217 IPR044846 GO:0004553|GO:0005975
Amo19g4256 314 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 30 108 - -
Amo19g4256 314 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 218 311 - -
Amo19g4256 314 Gene3D Glycosidases 85 276 - -
Amo19g4256 314 PANTHER GLYCOSYL HYDROLASE 30 108 IPR044846 GO:0004553|GO:0005975
Amo19g4256 314 PANTHER GLYCOSYL HYDROLASE 218 311 IPR044846 GO:0004553|GO:0005975
Amo19g4256 314 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 108 217 - -
Amo19g4256 314 SUPERFAMILY (Trans)glycosidases 103 259 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4256 Amo-Chr19 159281669 159284084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4256 106 311 Glycoside Hydrolase AT2G14690 39.754 2.08e-48 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4256 - - gsj:114403439 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4256 19 159281669 159284084 Amo19g4256 19 159281669 159284084 ECH