Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4252 ATGGCAGCAGGAGGTGGTGGAAAGTCTGATGATGACTTTCAACCTCATCCTGTGAAGGATCAACTTCCCGGTGTTGATTACTGCATTACCAGCTCCCCCTCATGGCCTGAAGGGATACTACTTGGGTTTCAGAACTACCTCGTTATGCTTGGCACCATCGTCTTTCTTTCTACCTTACTTGTCCCTTTGATGGGTGGTGGCAATGTGGAGAAGGCTGAAATGATACAGACTCTGCTCTTTGTTGCTGCCATTAACACTCTCTTGCAGACATGGTTTGGAACAAGGCTTCCAGTGGTTGTGGGGGCTTCCTATGCCTTCATCATTCCCGCTATTTCTGTTGCTTTCTCCTCAAGGATGAGTGTTTTCATAGACCCTCACCAGAGATTTAAACAATCCGTGAGAGCCATACAAGGTGCACTCATTGTTGCGTCCGTATTCCAAATCATAATCGGCTTCTTGGGATTCTGGAGAATATTTGCAAGGTTCCTTAGTCCCCTAAGTGCGGTTCCCCTTGTCACTCTTACTGGCCTTGGATTCTTTGCGCTTGGCTTCCCAAAATTGGCAAATTGTGTTGAAATTGGGCTCCCTGCATTGCTTATTCTGGTGATATTGTCCCAGTACATTCCCCAGATAATGAAATCAAGAGTAGTTGATAGATACTCAGTAATATACTCTATTGGAATTGCATGGGCATTTTCTGAGATTTTGACTGCAGCTGGTGCATATAAAGGAAGATCACCAATTACTCAATTGAGTTGCCGTACTGATCGATCCGGGTTAATTAGTGCTGCTCCTTGGTTAAGAGTCCCATATCCATTTCAATGGGGAGCCCCTTCTTTCAATGTTGGTGATGCTTTTGCAATGGTTGCTGCTTCTCTAGTTGCAATTATAGAGTCAACTGGGACATTCATTGCAGCCTCAAGATTTGGAAGTGCAACTCCTGTTCCACCATCTGTCCTTAGCCGTGGTATTGGTTGGCTGGGCATTAGTAATCTTGTGGATGCCTTTTTCGGCACGGCAACTGGATCCACTGCATCAGTTGAAAATGCAGGACTATTGGGTTTAACACGAGTTGGAAGTCGAAGGGTCGTTCAAATATCAGCAGGATTCATGTTTTTCTTCTCTATATTAGGAAAATTCGGAGCTGTTCTTGCTTCGATCCCATTGCCAATTGTAGCAGCTGTGTACTGCATTCTCTTTGCCTATGTAGCATCAGCAGGCCTTTGTTTTCTTCAATTCTGTAATCTAAACAGCTTCAGAACAATGTTCATCATTGGCTTTTCTCTCTTCATGGGCCTTTCCGTTCCTCAATACTTCAATGAATATCTGTTAATATCTGGTCATGGCCCTGTTCATACTCGCTCCATTGCTTTCAACAGTATAGTGCAAGTGATTTTCTCATCCCCAGCAACTGTGGCAATTATAGTAGCTTACTTGTTGGATTTTACCATGAGTCGCGGCCACAGCGCAACGAGGCGTGACAGTGGGAGACACTGGTGGGGAAGGTTCAGGAACTTCGATCAGGATATTAGAACCGAAGAGTTCTATTCCCTGCCTATGAACCTTAATAGATTTTTCCCTTCATTCTGA 1590 0.4447 MAAGGGGKSDDDFQPHPVKDQLPGVDYCITSSPSWPEGILLGFQNYLVMLGTIVFLSTLLVPLMGGGNVEKAEMIQTLLFVAAINTLLQTWFGTRLPVVVGASYAFIIPAISVAFSSRMSVFIDPHQRFKQSVRAIQGALIVASVFQIIIGFLGFWRIFARFLSPLSAVPLVTLTGLGFFALGFPKLANCVEIGLPALLILVILSQYIPQIMKSRVVDRYSVIYSIGIAWAFSEILTAAGAYKGRSPITQLSCRTDRSGLISAAPWLRVPYPFQWGAPSFNVGDAFAMVAASLVAIIESTGTFIAASRFGSATPVPPSVLSRGIGWLGISNLVDAFFGTATGSTASVENAGLLGLTRVGSRRVVQISAGFMFFFSILGKFGAVLASIPLPIVAAVYCILFAYVASAGLCFLQFCNLNSFRTMFIIGFSLFMGLSVPQYFNEYLLISGHGPVHTRSIAFNSIVQVIFSSPATVAIIVAYLLDFTMSRGHSATRRDSGRHWWGRFRNFDQDIRTEEFYSLPMNLNRFFPSF* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4252 529 Pfam Permease family 39 439 IPR006043 GO:0016020|GO:0022857|GO:0055085
Amo19g4252 529 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 7-RELATED 7 528 - -
Amo19g4252 529 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 7 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4252 Amo-Chr19 159256651 159259456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4252 9 529 Organic Solute Cotransporters AT1G49960 69.407 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4252 - K23717 gmx:100820533 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4252 19 159256651 159259456 Amo19g4252 19 159256651 159259456 ECH