Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4240 ATGGCGATGCAGGGCAATACAAGCCCTTGCATCGAAGAAGTAGCAAAAGATGGGTATGACTCTAATAAATTTGATGACGATGGTCATCCAAAACGAAAAGGAACATGGATAACTGCGAGTGGACATATTTTGACGGCTGTTATAGGCTCAGGGGTGCTATCTCTTGCATGGGCCATTGCCCAGTTGGGTTGGATTGCAGGACCCATTGTCCTCATGCTCTTCTCACTCATCACTCTCTACACTTCTTTTCTCCTCACCGATTGTTATAGGTCCCCTGACCCTGTTCATGGAACCAGGAACCACACGTATAGGAACATGGTCAAGAATATTCTAGGAGGAACTCAACACCATTATTGTGGATTGGCTCAATACATAAATCTGATTGGAGCAAGCATTGGATATACTATCACTGCAGCCATTAGTATGGTGGCTATACAAAGATCCAATTGTTATCACAAAAATGGGCATGATGCAGTGTGTACTATGCCAAACTACCCTTATATGATCATGTTTGGGATCATAGAGATTATATTAAGCCAAATCCCAGACTTCCATGAACTTTCATGGCTCTCTGCTCTTGCTGCTATCATGTCTTTTGGTTATGCTACCATAGGGATTGGTCTCTCCATAGCCAAAGTTGCAGGGAGAAGCCATGCCAGAACAAGCCTTACCGGGGTTACCATTGGAGTGGATGTGACAAGCAGCGAGAAGCTATGGAATACTTTTACAGCTTTGGGAAACATTGCTTTTGCATATAGCTTCAGTTCTGTCATTGTTGAGATACAGGATACATTGAAATCGGGTAAACCGGAGAACCGAGTGATGAAGGTGGCTGCTTCTACATCAGTGGCAGTCACCACTGTGTTCTATATGCTATGTGGTATGATAGGCTATGCAGCGTTTGGGAACGATGCACCTGGAAACTTCTTAACAGGATTTGGTTTCTATGAGCCATTTTGGCTTATTGACATTGGTAACATTTTCATCGTCGTTCATCTCGTCGGCGCCTACCAGGTGTACACACAGCCCGTGTTTTTGCTGGTGGAAAATTGGTGCAAGGAGCGTTGGCCTGAAAGCAGCTTCATGGCAAAAGAGCATCACATAAAGATTCCATTGGTTGGAACCTATAGAATGAATCCTTTCAGGCTAATATGGAGGACATTGTATGTGATATTGTCAGCAGTGATTGCTATATTACTTCCTTTCTTCAACAGCATTGTTGGTTTGCTTGGAGCTCTTGCATTCTGGCCATTGACAGTGTACTTTCCAACAAAGATGTACATGGTACAATCTAAAGTGCCAAAGTTCTCTATGAGATGGACAGGGTTGAAGTTGCTAAGTGTGTTCTGCTTGCTGATTTCAATTGTTGCTGCAGCTGGATCAATTGAAGGAATTATTAAAGAACTTAAAGTTTACAAGCCATTCTAG 1428 0.43 MAMQGNTSPCIEEVAKDGYDSNKFDDDGHPKRKGTWITASGHILTAVIGSGVLSLAWAIAQLGWIAGPIVLMLFSLITLYTSFLLTDCYRSPDPVHGTRNHTYRNMVKNILGGTQHHYCGLAQYINLIGASIGYTITAAISMVAIQRSNCYHKNGHDAVCTMPNYPYMIMFGIIEIILSQIPDFHELSWLSALAAIMSFGYATIGIGLSIAKVAGRSHARTSLTGVTIGVDVTSSEKLWNTFTALGNIAFAYSFSSVIVEIQDTLKSGKPENRVMKVAASTSVAVTTVFYMLCGMIGYAAFGNDAPGNFLTGFGFYEPFWLIDIGNIFIVVHLVGAYQVYTQPVFLLVENWCKERWPESSFMAKEHHIKIPLVGTYRMNPFRLIWRTLYVILSAVIAILLPFFNSIVGLLGALAFWPLTVYFPTKMYMVQSKVPKFSMRWTGLKLLSVFCLLISIVAAAGSIEGIIKELKVYKPF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4240 475 Pfam Transmembrane amino acid transporter protein 32 466 IPR013057 -
Amo19g4240 475 PANTHER OS05G0424000 PROTEIN-RELATED 19 471 - -
Amo19g4240 475 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 19 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4240 Amo-Chr19 159100064 159101858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4240 20 475 Organic Solute Cotransporters AT5G49630 63.617 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4240 K24917 - gmx:100795817 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4240 19 159100064 159101858 Amo19g4240 19 159100064 159101858 ECH