Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4186 ATGACTTCAATGGAAAAGCAATCTTCATTTGTTGCAAGGCTATTGCTGTTTCTGCTCTTAGCTTTCAATGTTCCACTCACTCATTCCTCATCATCATCAACAGAGAATGGAGAATGGGATATGGAGGATAATGGCACCCTCAAGGTTACGTTCTCTGAGGGTGCTACCCACTGGACCGATGCCATACCCATCGGAAATGGCCGTCTTGGGGCCATGATTTGGGGTGGCGTTTCATCGGAACTTATCCAGCTCAATGAGGACACACTTTGGACTGGGACGCCTGGCAACTATACCGACAGCACCGCTCCGGCAGCACTGGCTGAAGTCCGCAAACTTGTCGATAATAGAAATTACTCTGGAGCTACAGAAGAAGCTCTCAAATTGTTAGGAGGTCCTGGTGCCATGTACCAACTTCTTGGTGATATCAAGTTAGAATTTGACGATTCTCATGCTACATACTCGAATGAGTCTTACTACAGAGAGCTGGATTTGGATACTGCGACAACAAAAGTAAAATACTCTGTGGGTGATGTAGAATATAGTAGAGAACATTTTGCTTCTCATCCAGACCAAGTAATAGTGTCAAGAATTTCTGCAAGCAAGCCAGCTTCGTTGTCATTAACAGTGTCTTTGGATAGCAAATTACCTCACAGTTTGCAAGTTTGTGGCCAAAATCAGGTACTAATGAAAGGAAGCTGTCCTGGTGAGAGGCAACCACCAAAAGTGAATTCAAGTGCCAATTTAAAGGGAATTCAATTTTCCGTTGTTCTTGATGTACAGATTAGTGGTGAAAAGGGGATTGTGCATGTTTTGGAAGGTTCAAAATTAAGGATTGAAGGTTCGGATTCTGTTGTTTTGCTTCTGACAGCTTCTTCTTCTTTTGATGGACCATTCACAAAACCTGAAGACTCTAAGAAGGACCCTACTTCAGACTCCCTCAACACAATGAAGTCAAATCTTTCCTCTCAAACCATTCCAACTTCGGCAAGGGTCAAATCTTTCCAAACAGATGAAGATCCTTCACTTGTAGAGCTTTTGTTTCAATATGGTCGATATCTACTTATTTCAAGTTCACGTCCTGGAACTCAGGTGGCAAACCTGCAGGGTATATGGAACGAAGAACTTGAGCCTAAATGGGATGGTGCTCCTCACTTGAACATTAATCTTCAAATGAACTATTGGCCATCTCTTCCTTGCAACTTACTTGAGTGTCAAGAGCCGCTATTTGATTACATTACCTCTTTGTCAGTCAGTGGAAGTAAAACTGCAAAGGTGAATTATAAAGCAAATGGTTGGGTTACACATCATGTTTCTGACATATGGGCTAAATCATCCGCATATGCAGGTCCTGCGGTCTGGGCATTATGGCCAATGGGTGGAGCTTGGCTCTGTACCCATCTATGGGAGCATTATACTTATACAATGGACAAAGAGTTTCTTAGAACCAAGGCATATCCTTTGTTGGAAGGATGTACTTTATTTTTGTTGGATTGGTTGATTGAAGGCCATAATGAATTATCAGAAACCAACCCGTCAACTTCACCGGAACACATGTTCATTGCACCAGATCAAAAGCCTGCCAGTGTGAGCTACTCGACAACCATGGACATGTCAATCATCAAAGAAGTTTTCTCATCAATTGTATCCGCTGCTGAGGTTTTGGGGACAAGTAATGATGCTGTTATCAAAAGAGTAACTGAGGCTCAGTCCAAGCTTCCACCAATAAAAATTGCTAGGGATGGATCTGTTATGGAATGGGCAGAAGATTTCCAGGATCCTGAAGTACATCATAGACATCTTTCGCACCTATTTGGCCTCTTTCCAGGGCACACAATAACTCCTGAAAAAACTCCAGACATCTGTGAAGCTGCAAATCGCACTCTATTCAAAAGAGGAGAGGATGGTCCCGGGTGGTCAACAACTTGGAAAGCTGCATTGTGGGCACGTCTTAACAACAGTGAGCACGCATATCGCATGGTAAAGCACTTGATTGTCTTGGTGAACCCTGAACATGAAGTTGGTTTTCAGAGAGGACTCTACAGTAACCTGTTCAATGCACATCCCCCTTTTCAAATCGATGCAAACTTTGGTTTCTCAGCAGCAGTTGCAGAAATGCTTGTTCAGAGCACAATGAAGGACCTTTACTTGCTTCCGGCATTGCCTCGCGACAAATGGCCGAACGGCTGCGTGAAAGGATTGAAAGCACGTGGCGGGATCACAGTGAACATATGCTGGAAAGAAGGTGATCTGCATGAAGTTGGGCTATGGTCAGAAAACCAGAAATCCCAAGTGAGACTACACCATAGAGAAACCATGGTGCTAGCAGAATTATCACCAGGCATAGTTTACTCTTACAATAATCAGTTGAAGTGTGTGAAGACTGAAGACATATTCCATTGCTGA 2403 0.4332 MTSMEKQSSFVARLLLFLLLAFNVPLTHSSSSSTENGEWDMEDNGTLKVTFSEGATHWTDAIPIGNGRLGAMIWGGVSSELIQLNEDTLWTGTPGNYTDSTAPAALAEVRKLVDNRNYSGATEEALKLLGGPGAMYQLLGDIKLEFDDSHATYSNESYYRELDLDTATTKVKYSVGDVEYSREHFASHPDQVIVSRISASKPASLSLTVSLDSKLPHSLQVCGQNQVLMKGSCPGERQPPKVNSSANLKGIQFSVVLDVQISGEKGIVHVLEGSKLRIEGSDSVVLLLTASSSFDGPFTKPEDSKKDPTSDSLNTMKSNLSSQTIPTSARVKSFQTDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNEELEPKWDGAPHLNINLQMNYWPSLPCNLLECQEPLFDYITSLSVSGSKTAKVNYKANGWVTHHVSDIWAKSSAYAGPAVWALWPMGGAWLCTHLWEHYTYTMDKEFLRTKAYPLLEGCTLFLLDWLIEGHNELSETNPSTSPEHMFIAPDQKPASVSYSTTMDMSIIKEVFSSIVSAAEVLGTSNDAVIKRVTEAQSKLPPIKIARDGSVMEWAEDFQDPEVHHRHLSHLFGLFPGHTITPEKTPDICEAANRTLFKRGEDGPGWSTTWKAALWARLNNSEHAYRMVKHLIVLVNPEHEVGFQRGLYSNLFNAHPPFQIDANFGFSAAVAEMLVQSTMKDLYLLPALPRDKWPNGCVKGLKARGGITVNICWKEGDLHEVGLWSENQKSQVRLHHRETMVLAELSPGIVYSYNNQLKCVKTEDIFHC* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4186 800 PANTHER ALPHA-L-FUCOSIDASE 2 323 796 - -
Amo19g4186 800 SUPERFAMILY Six-hairpin glycosidases 337 759 IPR008928 GO:0005975
Amo19g4186 800 Pfam Glycosyl hydrolase family 65, N-terminal domain 51 296 IPR027414 -
Amo19g4186 800 PANTHER ALPHA-L-FUCOSIDASE 2 40 318 - -
Amo19g4186 800 PANTHER - 323 796 - -
Amo19g4186 800 Gene3D - 299 706 IPR012341 GO:0005975
Amo19g4186 800 PIRSF UCP007663 24 324 IPR016518 GO:0004560
Amo19g4186 800 PIRSF UCP007663 317 796 IPR016518 GO:0004560
Amo19g4186 800 PANTHER - 40 318 - -
Amo19g4186 800 MobiDBLite consensus disorder prediction 297 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4186 Amo-Chr19 158509531 158524086 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4186 K15923 - gmx:100817294 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4186 19 158509531 158524086 Amo19g4186 19 158509531 158524086 ECH