Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4184 ATGATCCTGTGTCTTGCACTAACTCTAACAGCTGCTACCTTTGATCAGGAAATTGGTGCTGAATATGCCCAGCAAACGCTCATTGCTGCCACCAACTTCATAGACAGATTATTTGGCCTAAACAGCAATCTTGCAGCAGTCAACAAAGTCTCCATCACAGTTGAGAACATCGATGGAGTCGCATTCACTACCAGCGACAACAACATTCATGTGAGTGCAGGGTATATCAAAAGGGAAATAACCGTGGTCATCTGTCACAAAATGGCGCATATATTGCTATCCGATGGGAGTGACAGGGCCCGGCTGCCTTCTGGACTTGTTGAAGGCATGGCGGATTTTGTGAGGTTGAGGGCTGACTATGCTGCAGATAGCTGGGATGATGTAGCTGGGTTTGTTGCGGATTTGAACAAGTTGATGATGCAAAATGGATACAGTAAGAGCTACTTGGTTCTGCTTCTAGGGAAGCCAGTTTCTCAACTTTGGATTGAATACAAGGCCTTATATGATCTCAACAACTGA 519 0.4528 MILCLALTLTAATFDQEIGAEYAQQTLIAATNFIDRLFGLNSNLAAVNKVSITVENIDGVAFTTSDNNIHVSAGYIKREITVVICHKMAHILLSDGSDRARLPSGLVEGMADFVRLRADYAADSWDDVAGFVADLNKLMMQNGYSKSYLVLLLGKPVSQLWIEYKALYDLNN* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4184 172 PANTHER PLANT BASIC SECRETORY PROTEIN (BSP) FAMILY PROTEIN 12 126 - -
Amo19g4184 172 PANTHER PLANT BASIC SECRETORY PROTEIN (BSP) FAMILY PROTEIN 129 167 - -
Amo19g4184 172 Pfam Peptidase of plants and bacteria 10 126 IPR007541 -
Amo19g4184 172 Pfam Peptidase of plants and bacteria 129 164 IPR007541 -
Amo19g4184 172 PANTHER - 12 126 IPR007541 -
Amo19g4184 172 PANTHER - 129 167 IPR007541 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4184 Amo-Chr19 158463739 158464362 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4184 - - aprc:113871870 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4184 19 158463739 158464362 Amo19g4184 19 158463739 158464362 ECH