Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4182 ATGGCGCGGAGGTTGTTGGCGGCACTGGCAGCCATTTCCATAACCGTCTCTGTACTTTTCGGAGATTCCGTTGACTGCTTCGACGGTGGCGGCAAATCCGAACCACAGCCCACTCTCTGCGACGAGCTCATTCTCCCCGCCGGTTACCCCTGCTCCGAATACATGATTCAAACGAAGGATGGTTTCTTGTTAGGTCTTCAGCGTGTGTCTTCTTCTTCGTCTTCTCTTCGTTTCGGGCATGCAGGAGAGCGAGGCCCTCCGGTTCTGCTTCTGCATGGCCTATTCATGGCAGGTGATGCATGGTTTCTAAATACTCCTGAACAATCATTGGGCTTCATCCTTGCAGATCAAGGTTTTGATGTATGGGTAGGAAATGTACGGGGAACACGCTGGAGCCATGGCCATAGGTCTTATTCAGTGAAGAATAAGAAATTCTGGGATTGGAGCTGGCAGGAATTAGCCCTGTATGATATGGCAGAAATGATCAATTACATATATTCAGTAACAAATTCAAAGCTATTCATAGTTGGGCATTCACAGGGAACAATTATATCTTTTGCTGCCTTCACTCAACCGGATATAGTAGAAAAAGTTGAAGCTGCAGCCCTTCTTTCTCCAATATCATATTTAGATCATGCCACTGCACCTCTTGTGCTTAGAATGGTTAGCATGCACATCGATCAGATGGTTCTTACCATGGGTATTCATCAACTGAACTTCAAAAGTGAGTGGGGAACCAATCTCTTGGTTTCCTTGTGTGATACGCGTCTAAGCTGCGGTGACATGCTTTCATCCATAACAGGGAAGAACTGTTGCTTCAATGAGTCACGTGTGGCCTATTATCTTGATCAAGAACCTCACCCGTCATCTGCCAAAAACTTGAACCACCTTTTCCAGATGATCCGCGAAGGTACTTTCTCCAAGTATGATTATGGAAAGTTAAAAAATGTGAAAGTGTATGGAAAGTTCAAACCACCAAAGTTCGATCTTAGCCGCATACCAAAATCATTGCCTTTGTGGATGGCTTATGGTGGAAATGATGCTTTAGCAGATGTAACAGATGTCAAGCACACTCTCCAGGAATTGCCATCCACACCGGAGCTGGTTTATCTTGAAAACTATGGCCATGTTGACTTTATTTTAAGCTTGCAAGCAAGACAAGATCTATATGATCCTATGATTAATTTTTTCAAGTCATCGGGCAAATATAGTAGCATTTAA 1221 0.4414 MARRLLAALAAISITVSVLFGDSVDCFDGGGKSEPQPTLCDELILPAGYPCSEYMIQTKDGFLLGLQRVSSSSSSLRFGHAGERGPPVLLLHGLFMAGDAWFLNTPEQSLGFILADQGFDVWVGNVRGTRWSHGHRSYSVKNKKFWDWSWQELALYDMAEMINYIYSVTNSKLFIVGHSQGTIISFAAFTQPDIVEKVEAAALLSPISYLDHATAPLVLRMVSMHIDQMVLTMGIHQLNFKSEWGTNLLVSLCDTRLSCGDMLSSITGKNCCFNESRVAYYLDQEPHPSSAKNLNHLFQMIREGTFSKYDYGKLKNVKVYGKFKPPKFDLSRIPKSLPLWMAYGGNDALADVTDVKHTLQELPSTPELVYLENYGHVDFILSLQARQDLYDPMINFFKSSGKYSSI* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4182 406 PIRSF Steryl_ester_lip 1 402 IPR025483 GO:0016788
Amo19g4182 406 Gene3D alpha/beta hydrolase 32 399 IPR029058 -
Amo19g4182 406 Pfam Serine aminopeptidase, S33 110 236 IPR022742 -
Amo19g4182 406 PANTHER TRIACYLGLYCEROL LIPASE 1 30 400 - -
Amo19g4182 406 Pfam Partial alpha/beta-hydrolase lipase region 42 105 IPR006693 GO:0006629
Amo19g4182 406 SUPERFAMILY alpha/beta-Hydrolases 41 398 IPR029058 -
Amo19g4182 406 PANTHER LYSOSOMAL ACID LIPASE-RELATED 30 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4182 Amo-Chr19 158453403 158458526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4182 35 405 Acyl Lipid Metabolism Gene Families AT2G15230 64.690 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4182 K01052 - gmx:100803830 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4182 19 158453403 158458526 Amo19g4182 19 158453403 158458526 ECH