Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4181 ATGGCTTCCGACGAAAAAACAGAGCTTCACGTTCTGTTGGTGGCGTTTTCAGCGCAAGGCCACATCAACCCGCTCCTGAGGTTCGGCAAAAGCCTCTTAACAAGAGGCCTCCACGTCACACTCGCCACCACCGAACTTGTTTACCTCCGCGTCTTCAAGAAGCCCACCGACGACGACACCATCCCTGCCTCCATAACCGTCAACGGAATCCACGTGGTCTTCTTCTCCGACGGCTTTGTATCAGAGCCAGAGCTCAAAAGCACCAGCGTCGACGACTTCATGGAATCAATAGCAAAATCAGGTCCCATTAGCATCTCCAATATCATCAAAGATCAATTCCTAAGTAACACTTCCAAGAAGCTAGCATGCATAATCAACAACCCCTTTGTTCCATGGGTTGCTGACGTGGCAGCAGAGTTCGGAATCCCATGCGCATGTCTCTGGATTCAACCATGTGCTCTCTACGCCATTTATTACCGCTTCTACAACAATCTCAACTCCTTCCCAACTCTCCAGAACCCTAACATCCAAGTCCAGCTGCCCGGTCTTCCATTGCTGCAACCACAAGACCTTCCATCTTTTGTTCTCCCATCAAACACTTTCGGAAGCTTCCAGAAAGTATTAGCCGACATGTTGCAGTTCCAACACATGAAGAAGCTCAAGTGGATTCTCGCCAATTCGTTCTACGAGCTCGAGAAAGATGTGATAGACTCCATGGCCGAGATTTTTCCTATCAAACCGGTGGGTCCGTTGGTTCCTCCGTCGTTGCTACTAGGTTGTGACGACGACGACGACGTTGGAATCAATATGTGGAAGCCACAAGACTCGTGCATGGAGTGGCTCAACCAAAAGCCACGCTCTTCGGTTATATACATATCGTTCGGAAGCCTCGTGGTGTTATCGGAAAATCAATGGAAGAGCATAGCGGACGCTGTTGTTCGGAGTAAACGACCGTTTCTTTGGGTGATAAAGCTTAAAGATGGGACCGTACAAGATCCGTCGCAAATTCCGTCAGCGAGTTTCTTGGAAGAGACGAAAGAGCAGGGCATGGTGGTGCCATGGTGCCCGCAGACGAAGGTTCTTTCACACGATTCCGTTGCGTGTTTCTTGACTCACTGTGGTTGGAACTCGATGCTGGAAGCCATAACTGCGGGGGTTCCGATGATTGCGTATCCGCAGTGGACGGATCAACCAACGAATGCGAAGCTCATTTCGGATGTGTTTGGAACGGGGATCCGGCTCCGGCAAGACGACGGCGGCGAAGGGTTCGTTGCGACGGAGGAGGTGGAAAGAGCCATTGAAGAGATTTTTGTGGGCCCCCGAGCGGAGGAGATTAGGAAGAACGCCAGAGTGCTGAAACAGGCGGCGAGGGATGCGGTGGCTGAGGGTGGTTCATCTGACCGAAATATCCAATGTTTCGTGGACGAGATTCTTCAAAATCAGAGATGA 1449 0.5086 MASDEKTELHVLLVAFSAQGHINPLLRFGKSLLTRGLHVTLATTELVYLRVFKKPTDDDTIPASITVNGIHVVFFSDGFVSEPELKSTSVDDFMESIAKSGPISISNIIKDQFLSNTSKKLACIINNPFVPWVADVAAEFGIPCACLWIQPCALYAIYYRFYNNLNSFPTLQNPNIQVQLPGLPLLQPQDLPSFVLPSNTFGSFQKVLADMLQFQHMKKLKWILANSFYELEKDVIDSMAEIFPIKPVGPLVPPSLLLGCDDDDDVGINMWKPQDSCMEWLNQKPRSSVIYISFGSLVVLSENQWKSIADAVVRSKRPFLWVIKLKDGTVQDPSQIPSASFLEETKEQGMVVPWCPQTKVLSHDSVACFLTHCGWNSMLEAITAGVPMIAYPQWTDQPTNAKLISDVFGTGIRLRQDDGGEGFVATEEVERAIEEIFVGPRAEEIRKNARVLKQAARDAVAEGGSSDRNIQCFVDEILQNQR* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4181 482 PANTHER GLYCOSYLTRANSFERASE-RELATED 8 479 - -
Amo19g4181 482 ProSitePatterns UDP-glycosyltransferases signature. 354 397 IPR035595 -
Amo19g4181 482 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 480 - -
Amo19g4181 482 Gene3D Glycogen Phosphorylase B; 265 458 - -
Amo19g4181 482 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 8 479 - -
Amo19g4181 482 Coils Coil 442 462 - -
Amo19g4181 482 CDD GT1_Gtf-like 9 461 IPR002213 GO:0008194
Amo19g4181 482 Gene3D Glycogen Phosphorylase B; 14 470 - -
Amo19g4181 482 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 241 440 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4181 Amo-Chr19 158408566 158410695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4181 1 477 Glycosyltransferase AT2G23260 44.856 9.51e-140 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4181 K13692 - gmx:100778995 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4181 19 158408566 158410695 Amo19g4181 19 158408566 158410695 ECH