Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4170 ATGAAGAATTCTCACACTCTTCTCTCCCACCTCCTTCCCTTTCTATGCACTCTGTCTCTCCGCTACTCTGCACAAGCACTTCCAGACTTCGCTGCCTATCCTTCCATCCCCGGAACCGATTCCGGCGACTGCTCGATAGGCAGCGGAGACAATCCCCTCGTCCCTCCACGGCGGGAAGTGTACGACGAGGGGAGAATCTTTGACATCAGCCACAGGTACACCACGGAGATGCCGCTATGGGAATCTGAGGAGGAGCTTGGGTACTTGATGTGGTTGACTCGGAGTATGAGGAATGGTTCCGTCGCCAATTTCTCTACTTTTAAGCTTGGCCTTTACATCGGCACCCATGTCCATTCAGGCTTTGACGTCGATCTCCTCGATTTACAGCTCCTCAATGGTCTTGCTCTGCTGATTGATGTTCCACGGGACAAAAACATCACTGCTGAAGTTATGAAATCACTGGATATCCCTAAAGGTGTACAACGTGTGCTATTTAGAACATCAAATACTGACAGGAGGCTTATGTTTAAGAAGGGATTTGATGCAAGCTATGTGGGATTCAAAGAAGATGGAGCCAAATGGCTGGTGGAAAACACTGACATCAAACTTGTAGGAGTTGATTACTTATCTGCTGCTGCTTATGATCATTTGGTGCCATCTCGTCTTGCTTTTCTGGAAAGCAGGGACATGATTATTGTGGAAGGACTAAAGCTAGATGATGTGGCAGCAGGAGTGTATTCACTGAGATGCTTGCCTCTTAGGTTGGTTGGCTCTGAGGCATCACCAATACAACAGTGGGGAGAGAGGAATCAGCCCATCGAAGGAAGAAGCAGCATGGACTCTGTTTTGGTACTTGCGCTTCTGTGCGCAGCACTTTCTCTATGGTACATCGCAGCTGCTGCACCTCCACATGCAGCGGCAGACTTCACCGCTTATCCTACCATCCCCGGCACCGAAGACGTCTCAGTCGCTGGAGCCAACTCCATCCTCATCCCTCCGCGCCGAGAAGTCTACGATGACGGCAGAATCTTCGACATCAGCCACAGGTACGTGCCGGATATGCCGGTTTGGGATTCCAAGGACGGCCTCGGCAACGACTTCCTCTGGCTTCTCAAGAGCATCAAGAACGGTTCCCTCGCTAACAACTCCGCCATGAAGCTCGGCGTTCACACCGGCACTCACGTCGACGCTCCTGGCCACTTCTACGATAATTACTTCGACGCTGGCTTCGATGTCGATACTCTTGATTTACAGATCCTCAATGGTCTCGCTCTGTTGGTTGATGTTCCTAGGGATAAAAACCTTACCGCTGAAGTTATGAAGTCTTTAGATATCCCCAAAGGTGTTCGCCGTGTGCTATTCAGAACTTTAAATACTGAAAGGCAAGTTGTAGAAGTTGCTATGCGGCTCATGTTTAAGAAGGAATTTGACACCAGTTATGTGGGATTCAAGGAAGATGGAGCAAAATGGCTTGTGGAGAACACTGACATCAAACTTGTAGGGATTGATTATTTGTCAGTTGCTGCTTATGATCACTCAGCTCCATCTCATCTTGTTTTCCTGGAAAGCAGGCGGTCTCCCTAA 1584 0.4912 MKNSHTLLSHLLPFLCTLSLRYSAQALPDFAAYPSIPGTDSGDCSIGSGDNPLVPPRREVYDEGRIFDISHRYTTEMPLWESEEELGYLMWLTRSMRNGSVANFSTFKLGLYIGTHVHSGFDVDLLDLQLLNGLALLIDVPRDKNITAEVMKSLDIPKGVQRVLFRTSNTDRRLMFKKGFDASYVGFKEDGAKWLVENTDIKLVGVDYLSAAAYDHLVPSRLAFLESRDMIIVEGLKLDDVAAGVYSLRCLPLRLVGSEASPIQQWGERNQPIEGRSSMDSVLVLALLCAALSLWYIAAAAPPHAAADFTAYPTIPGTEDVSVAGANSILIPPRREVYDDGRIFDISHRYVPDMPVWDSKDGLGNDFLWLLKSIKNGSLANNSAMKLGVHTGTHVDAPGHFYDNYFDAGFDVDTLDLQILNGLALLVDVPRDKNLTAEVMKSLDIPKGVRRVLFRTLNTERQVVEVAMRLMFKKEFDTSYVGFKEDGAKWLVENTDIKLVGIDYLSVAAYDHSAPSHLVFLESRRSP* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4170 527 SUPERFAMILY Putative cyclase 341 523 IPR037175 GO:0004061|GO:0019441
Amo19g4170 527 SUPERFAMILY Putative cyclase 64 264 IPR037175 GO:0004061|GO:0019441
Amo19g4170 527 PANTHER KYNURENINE FORMAMIDASE-LIKE PROTEIN 297 524 - -
Amo19g4170 527 PANTHER KYNURENINE FORMAMIDASE-LIKE PROTEIN 10 264 - -
Amo19g4170 527 Pfam Putative cyclase 67 211 IPR007325 GO:0004061|GO:0019441
Amo19g4170 527 Pfam Putative cyclase 344 507 IPR007325 GO:0004061|GO:0019441
Amo19g4170 527 Gene3D Putative cyclase 60 266 IPR037175 GO:0004061|GO:0019441
Amo19g4170 527 Gene3D Putative cyclase 338 526 IPR037175 GO:0004061|GO:0019441
Amo19g4170 527 PANTHER CYCLASE-LIKE PROTEIN 2 297 524 IPR007325 GO:0004061|GO:0019441
Amo19g4170 527 PANTHER CYCLASE-LIKE PROTEIN 2 10 264 IPR007325 GO:0004061|GO:0019441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4170 Amo-Chr19 158232596 158243593 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4170 - - adu:107467328 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4170 19 158232596 158243593 Amo19g4170 19 158232596 158243593 ECH