Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4164 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGGTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTCTACCAAGTTCAAATAGATGCAGATCAGCAGAAAGTAACAGTTTCAGGAAGTGTGGATGCTGCAACTTTGATTAAGAAACTGGTCAGAGCTGGCAAATATGCTGAGCCATGGTCTCAGCAGAAAACAAATCAGAATCCAAAGCAGAAGAACAACAACAATATTGTCAAAGATGACAAGAACAAAGGGGGGCAAAAGCAGCAAGGACTGGTGAAGGGTCTTGAGGCCTTCAAGAATCAGCAGCAGAAGTTCCCATCTGCCTTTAGTTCTGAAGAGGATGATGATTACTACGACTACGATGATGAGGACGAAGACGATGACGAAGAGATGCGATTCATTAGGGAAAAAGCCAACCAACTTCATTTGCTGAGGCAGCAGGCAGCAGCAGCAGCAGCAGCAGAAGCAAACAACTTGAAGAAAGGTGTTGGAGCAATTTCTGGTGGTTCCAACAATGTTAAAATGAACAACAATGCTGGCAATAACAACAATGTTGGTAAAAAGGGAGGACCTGGTAATAACATGGGACTTAAGGATGGTCATGGTGGTGTTCTTGATCAGAAAACCATGGCAGCACTGAAATTGAACAATGGCCACATGGGGGGTGGTGAAGGACTCAATCTTGGAGAAGCCAAAAGGGCTAGTGACATTGGTGCAATGATGAATCTAGCTGGTTTCAATGGGAATAATAACAACAATGTTGCTAATAATGTTGGCAATGCCACTGTTCTTGGGGCAAATTCCAATGGTTTGGGTGGATTTCCTGTTCTGTCTAACAACATGGCTCCAGGTTCTACAGCTGCTGTTCTCCCAAATGGTGCTTTTTCTACCGGCCAATACCCATCATCACTGCTAATGAACATGAATGGCTTCAATAACCACCCATCTCCATCCCCATTAATGATGAACATGAACATGCAGGCAAGACAAGCCATGCAGCAACAACCTCAGATGATGTATCACAGATCCCCGTTTGTTCCTCCCAACACTGGCTATTACTACAACCATAGTAATAACTACAGCCCTGCAAATTACTCTTATGCTTTGCCTAATTATTACCCACACCAGTGTCCAGCAACTGATGATAACTCTGCAGCACATATGTTCAGTGATGACAATACTAGTAGTTGTTCCATAATGTAA 1257 0.4288 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDADQQKVTVSGSVDAATLIKKLVRAGKYAEPWSQQKTNQNPKQKNNNNIVKDDKNKGGQKQQGLVKGLEAFKNQQQKFPSAFSSEEDDDYYDYDDEDEDDDEEMRFIREKANQLHLLRQQAAAAAAAEANNLKKGVGAISGGSNNVKMNNNAGNNNNVGKKGGPGNNMGLKDGHGGVLDQKTMAALKLNNGHMGGGEGLNLGEAKRASDIGAMMNLAGFNGNNNNNVANNVGNATVLGANSNGLGGFPVLSNNMAPGSTAAVLPNGAFSTGQYPSSLLMNMNGFNNHPSPSPLMMNMNMQARQAMQQQPQMMYHRSPFVPPNTGYYYNHSNNYSPANYSYALPNYYPHQCPATDDNSAAHMFSDDNTSSCSIM* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4164 418 MobiDBLite consensus disorder prediction 76 91 - -
Amo19g4164 418 Pfam Heavy-metal-associated domain 17 70 IPR006121 GO:0046872
Amo19g4164 418 MobiDBLite consensus disorder prediction 130 145 - -
Amo19g4164 418 MobiDBLite consensus disorder prediction 121 145 - -
Amo19g4164 418 CDD HMA 16 75 IPR006121 GO:0046872
Amo19g4164 418 MobiDBLite consensus disorder prediction 75 107 - -
Amo19g4164 418 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Amo19g4164 418 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Amo19g4164 418 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 37 1 418 - -
Amo19g4164 418 Gene3D - 12 84 - -
Amo19g4164 418 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4164 Amo-Chr19 158153122 158155729 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4164 - - aip:107617736 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4164 19 158153122 158155729 Amo19g4164 19 158153122 158155729 ECH