Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4157 ATGGCAATCCCCTGCCCCCATTTCATTGCCTCCGAGAAAGCAGCCATGGAAGCTGGCCTTCTTCTCCCCTCTTCCTCTCTCTCTCAGCTCATTCTCACCCAAGACGATTTGAAGAAAATCGCAGCCTACAAAGCCGTCGAGTACGTCGAATCCGGTATGGTTCTCGGCCTCGGAACCGGCTCCACTGCCAAACACGCTGTCGACCGAATCGGCGAGCTTCTCCATCAAGGCAAGCTCAAGGACATCGTCGGAATACCCACTTCCAAGAAGACGCACGAGCAAGCCCTCTCTCTCGGGATCCCCTTGTCGGATCTGGACTCTCACCCCGTCGTTGATCTCGCCATTGACGGCGCCGACGAGGTTGATCCTTACCTTAACCTCGTCAAGGGACGCGGTGGCTCCCTCTTGAGGGAGAAGATGGTTGAAGGTGCTTGCAAGAAGTTCGTTGTAATCGTCGATGAGTCCAAGCTCGTTAACTATATTGGTGGTAGCGGTTTGGCTATGCCCGTTGAAGTTATTCAATTTTGTTGGAAGTTCACCGCTTCCAGGCTTCAGAATCTCTTTCAGGAATCTGGTTGCGTTGCAAAGCTCAGAACTTTGGGCGAAAAGGCTGAGCCTTATGTCACTGATAATGGCAACTATATAATTGATTTGTATTTCAAGCAGAGTATTGGGGATTTGAAGGCTGCCAGCGATTCCATTCTGCAAATCGCCGGTGTTGTGGAGCATGGAATGTTCATTGACATGGCTACCACTGTTATTGTTGCAGGTGAACTTGGCCTAACTGTCAAGAATAAGTAG 801 0.5056 MAIPCPHFIASEKAAMEAGLLLPSSSLSQLILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLHQGKLKDIVGIPTSKKTHEQALSLGIPLSDLDSHPVVDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVNYIGGSGLAMPVEVIQFCWKFTASRLQNLFQESGCVAKLRTLGEKAEPYVTDNGNYIIDLYFKQSIGDLKAASDSILQIAGVVEHGMFIDMATTVIVAGELGLTVKNK* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4157 266 TIGRFAM rpiA: ribose 5-phosphate isomerase A 37 260 IPR004788 GO:0004751|GO:0009052
Amo19g4157 266 SUPERFAMILY NagB/RpiA/CoA transferase-like 33 217 IPR037171 -
Amo19g4157 266 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 83 258 IPR004788 GO:0004751|GO:0009052
Amo19g4157 266 CDD RPI_A 37 257 IPR004788 GO:0004751|GO:0009052
Amo19g4157 266 PANTHER ISOMERASE, PUTATIVE-RELATED 1 266 - -
Amo19g4157 266 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 166 247 - -
Amo19g4157 266 Gene3D - 37 258 - -
Amo19g4157 266 Gene3D - 160 244 - -
Amo19g4157 266 Hamap Ribose-5-phosphate isomerase A [rpiA]. 34 264 IPR020672 GO:0004751|GO:0009052
Amo19g4157 266 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 1 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4157 Amo-Chr19 158077606 158079291 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4157 K01807 - gmx:100795150 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4157 19 158077606 158079291 Amo19g4157 19 158077606 158079291 ECH