LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo19g4128	ATGGGAACCGTTCCGATGAACATCGCTTCCCACGTCGACCTCCGTTCACGATTCCACCTCACATCGTCTTCTTCCTCGTCGTCTTCCTCATCCTCCTCTGTGCGGGTTTCCAACTTTTCTAAAACTATCAGCTTGAGCTTCCCTCTCTCTCGGAGGAAGCAGGGGAGGTTAGGTAGGTTTCCTTGCTTCGCCGTCGATGACGACTCCAGACTCCAGCAGCAAGACCTCGCCAATACTACTTCAACTGCTGTCGGCTCTGCCACTGAAGAAAGACCCACCGAAAATACGGATCTGCTTCCTGGTACAAATGGAGATGCTCCAGATAATTTTAAGCAAGATGGCGAAGGAAGTGCTATCTATGATTTCCTTTATCCTAGTAAAGAGCTTCTTCCCGATGATAAAGAAATGAGCATATTTGATCATCTTGAAGAGCTGCGACAGAGAATCTTTGTATCAGTTCTAGCTGTTGGAGGAAGCATTCTCGGATGCTTTGCATTTTCGAAAGATCTGATAGTGCTTCTAGAATCTCCTGTGAAGACACAGGGTGTAAGATTTCTTCAGCTAGGTCCTGGAGAATTTTTCTTTACAACTTTAAAGGTGTCTGGATACTGTGGCCTCCTCTTGGGAAGTCCTGTAATACTGTATGAGATTATAGCCTTTGTACTTCCAGGTCTCACAAAAGCTGAAAGAAAGTTTCTAGGGCCAATTGTATTGGGCTCGTCAGTTCTTTTCTATGCCGGAATAACTTTCTCCTATTTAGTTCTAACACCTGCAGCCTTAAACTTCTTTGTTAATTATGCTGAAGGTGCTGTTGAGTCGTTATGGTCTATTGATCAATACTTTGAGTTTGTCCTCGTCCTTATGTTCAGCACAGGCTTATCTTTCCAGGTACCTGTTATACAATTCCTATTGGGACAACTTGGGTTGGTGTCCGGAGACCAGATGCTATCAGTTTGGAGATATGTTGTGGTTGGAGCAGTGGTGGCCGCTGCTGTTGTTACACCCTCCACTGATCCACTCACTCAAGTTCTTCTAGCTGCACCTTTGTTGGGTCTTTACCTAGGTGGTGCATGGGCTGTCAAGCTTACAGGACGGTGA	1098	0.4554	MGTVPMNIASHVDLRSRFHLTSSSSSSSSSSSSVRVSNFSKTISLSFPLSRRKQGRLGRFPCFAVDDDSRLQQQDLANTTSTAVGSATEERPTENTDLLPGTNGDAPDNFKQDGEGSAIYDFLYPSKELLPDDKEMSIFDHLEELRQRIFVSVLAVGGSILGCFAFSKDLIVLLESPVKTQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTKAERKFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLLGLYLGGAWAVKLTGR*	366

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo19g4128	365	ProSitePatterns	TatC family signature.	280	299	IPR019820	-
	Amo19g4128	365	PANTHER	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	58	365	IPR002033	GO:0016021
	Amo19g4128	365	MobiDBLite	consensus disorder prediction	78	109	-	-
	Amo19g4128	365	TIGRFAM	tatC: twin arginine-targeting protein translocase TatC	138	353	IPR002033	GO:0016021
	Amo19g4128	365	PANTHER	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC, CHLOROPLASTIC-LIKE	58	365	-	-
	Amo19g4128	365	Pfam	Sec-independent protein translocase protein (TatC)	140	348	IPR002033	GO:0016021
	Amo19g4128	365	MobiDBLite	consensus disorder prediction	78	102	-	-
	Amo19g4128	365	Hamap	Sec-independent protein translocase protein TatC [tatC].	133	365	IPR002033	GO:0016021
	Amo19g4128	365	PRINTS	Bacterial Sec-independent translocation TatC protein family signature	137	164	IPR002033	GO:0016021
	Amo19g4128	365	PRINTS	Bacterial Sec-independent translocation TatC protein family signature	211	229	IPR002033	GO:0016021
	Amo19g4128	365	PRINTS	Bacterial Sec-independent translocation TatC protein family signature	229	255	IPR002033	GO:0016021
	Amo19g4128	365	PRINTS	Bacterial Sec-independent translocation TatC protein family signature	280	308	IPR002033	GO:0016021

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo19g4128	K03118		-	gmx:100801670	473.011

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo19g4128	19	157830704	157833616	Amo19g4128	19	157830704	157833616	ECH