Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4035 ATGGTTTCTCTTAGTCCTAGTCCATTGGTTGCACTGTGCTTATTATGTTTTCTTGCATTTTGTATACCTCAATCTTCTTCTGCAGTCACCAAAATTGGGCTAGGCTACCGTCTGATTTCAATTGAAAATGGAGCTGATGGTGCACTTGTTGGGACTCTCCAAGTTAAGCAGAGTAACAACATCTATGGTGCTGATATTCCCCTTCTAAGGTTCTACGCCAAGCACGAGAGTGAGAACCGTTTGAGGGTACACGTCACTGATGCAAAGAACAAAAGGTGGGAGGTTCCTTACAATCTTTTGCCGAGGGAGCAACCACCTCCTTTGAAGCAAAGCATTGCATTGTCAAGCTCTTCAGAGAAGAAGAAGAACAAGAAAAAGAAGAACCAAAGATCAGTGTCAGAGAAAGATTACCCTGGCTCTGAGCTTGTTCTTACTTACACTTCTGACCCTTTCAGCTTTGCGGTGAAAAGAAAGTCAAATGGGGACACCCTTTTCAACTCAAGCTCTGATGACACTGACCCATTTAGTTCATTGGTGTTCAAGGACCAATACTTGGAGATCTCTACCAAATTGCCCAGAGATGCTTCTTTGTATGGATTGGGAGAGAACTCACAGACACATGGGATCAAGTTGTATCCTAATGACCCTTACACTCTGTATACTACTGATATAGCAGCCATTAATGTCAATGCTGATTTATACGGGTCGCACCCAGTGTACATGGATCTCAGAAATGAGGGTGGCAAGGCATATGCACATGGTGTTCTGCTGCTGAATAGCAATGGAATGGATGTGTTTTACACAGGCACATCTCTAACATACAAGGTCATTGGAGGTGTTTTGGATTTCTACTTCTTTGCAGGACCTTCTCCTCTCAATGTTGTTGATCAATACACTTCTTTGATTGGAAGACCAGCTCCAATGCCTTACTGGGCTTTTGGATTTCACCAATGCAGATGGGGCTATCACAATCTATCTGTTATAGAAGATGTTGTGGAGAATTACCAGAAAGCTAAAATCCCACTTGATGTGATATGGACGGACGATGATCATATGGATGGGAAGAAGGACTTCACGCTGAACTCAGTGAACTACCCTCGTCCGAAGCTTCTAGAGTTCTTGGACAAGATACACAGCATTGGAATGAAATACGTTGTGATTGTTGATCCCGGAATTGCCGTTAATGCAAGCTATGGAGTATACCAAAGAGGAATGGCCAATGATGTTTTCATCAAGCACGATGGGGATCCCTTCTTGGGTCAAGTGTGGCCAGGTGCAGTGCACTTCCCAGATTTCCTGAATCCAAAAACAGTTTCATGGTGGGGTGATGAGATTCGTCGTTTCCATGAACTTGTACCCGTTGATGGCCTTTGGATTGACATGAACGAAGTTTCCAATTTCTGTAACGGAAAGTGCACAATCCCAGAGGGAAGAATTTGCCCCAATGGAACAGGACCTGGATGGATATGTTGCTTGGATTGCAAGAACATCACAAACACAAAATGGGACGACCCTCCTTACAAAATCAATGCTTCAGGAATAATGGCCCCGGTTGGTTACAAAACTATAGCCACAAGTGCTGTTCACTATAATGGGGTTCTAGAGTATGATGCTCACAGCCTCTATGGTTTCTCTCAATCCATTGCAACCCACAAGGGTCTCCAAGGGATTGAAGGGAAACGGCCTTTCATTCTTTCGCGCTCCACTTATGTTGGTTCAGGCAAGTATGTTGCACATTGGACAGGTGACAATCAAGGTACATGGGAGAATCTGAGATACTCAATATCCACAATGCTCAACTTTGGAATCTTTGGGATTCCAATGGTTGGTTCTGATATATGCGGTTTCTATCCACAACCAACTGAAGAGCTTTGTAATCGGTGGATTGAGGTTGGTGCTTTCTACCCTTTCTCAAGGGATCATGCAAACTATTACTCCCCAAGACAGGAGCTTTACCAATGGGAATCAGTAGCTGAATCTGCTAGAAATGCTTTGGGCATGAGGTATAAGATTCTTCCGTATCTCTACACACTCAACTATGAGGCTCATCTTAGTGGTGCTCCAATTGCAAGGCCACTTTTCTTCTCATTTCCATCTTTCACCCAATCCTACGGGCTCAGCACACAGTTCTTGCTTGGGAGCAGTGTCATGGTTTCTCCTGTGGTTGAACAAGGACAAACACAAGTTAAAGCATTGTTTCCTCCTGGCACGTGGTATAATTTGTTTGATATGGCACATGGTGTTGTATCCAAAGAAGGGACTTATGTCACTCTTGATGCGCCTCTACATGTGGTGAATGTGCATTTGTATCAGAATGCTATTCTTCCGATGCAACAGGGTGGAATGGTATCTAAGGATGCTAGAACCACACCCTTCAGCCTCATTGTGACATTCCCAGCAGGAGCAAAAGAAGGAGAAGCTCAAGGGAACCTCTTCCTCGATGATGATGAGCTACCGGAGATGAAGATAGCTAGTGGTTCTTCAACCTACATTGATTTCCATGCTACTATAAAGGATGGAACCGTGAGAGTGTGGTCACAGGTTCAAGAGGGTAAATTTGCCTTGGATAAAGGTTGGGTTATTGACAGCATAAATGTGTTGGGAGTAACTGGAAGTAAGGCAGTGATGGATGTGTCACAGTCACATGTGAATGTTAGTATAACGGAACAACAATTGTATGGGCAAGGTGATGATGGAGGAAGCAAGGTAGTGATGGTGGGAATGAATGGCTTGAATATTCCTGTTGGTAAAAATCTTGACATTACTTGGAAAATGGAATCATAA 2784 0.4368 MVSLSPSPLVALCLLCFLAFCIPQSSSAVTKIGLGYRLISIENGADGALVGTLQVKQSNNIYGADIPLLRFYAKHESENRLRVHVTDAKNKRWEVPYNLLPREQPPPLKQSIALSSSSEKKKNKKKKNQRSVSEKDYPGSELVLTYTSDPFSFAVKRKSNGDTLFNSSSDDTDPFSSLVFKDQYLEISTKLPRDASLYGLGENSQTHGIKLYPNDPYTLYTTDIAAINVNADLYGSHPVYMDLRNEGGKAYAHGVLLLNSNGMDVFYTGTSLTYKVIGGVLDFYFFAGPSPLNVVDQYTSLIGRPAPMPYWAFGFHQCRWGYHNLSVIEDVVENYQKAKIPLDVIWTDDDHMDGKKDFTLNSVNYPRPKLLEFLDKIHSIGMKYVVIVDPGIAVNASYGVYQRGMANDVFIKHDGDPFLGQVWPGAVHFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEVSNFCNGKCTIPEGRICPNGTGPGWICCLDCKNITNTKWDDPPYKINASGIMAPVGYKTIATSAVHYNGVLEYDAHSLYGFSQSIATHKGLQGIEGKRPFILSRSTYVGSGKYVAHWTGDNQGTWENLRYSISTMLNFGIFGIPMVGSDICGFYPQPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKILPYLYTLNYEAHLSGAPIARPLFFSFPSFTQSYGLSTQFLLGSSVMVSPVVEQGQTQVKALFPPGTWYNLFDMAHGVVSKEGTYVTLDAPLHVVNVHLYQNAILPMQQGGMVSKDARTTPFSLIVTFPAGAKEGEAQGNLFLDDDELPEMKIASGSSTYIDFHATIKDGTVRVWSQVQEGKFALDKGWVIDSINVLGVTGSKAVMDVSQSHVNVSITEQQLYGQGDDGGSKVVMVGMNGLNIPVGKNLDITWKMES* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4035 927 Pfam Glycosyl hydrolases family 31 284 775 IPR000322 GO:0004553|GO:0005975
Amo19g4035 927 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 50 192 IPR031727 -
Amo19g4035 927 MobiDBLite consensus disorder prediction 97 136 - -
Amo19g4035 927 Gene3D glycosyl hydrolase (family 31) 30 304 - -
Amo19g4035 927 Gene3D Glycosidases 305 670 - -
Amo19g4035 927 PANTHER ALPHA-GLUCOSIDASE 12 925 - -
Amo19g4035 927 PANTHER ALPHA-GLUCOSIDASE 12 925 - -
Amo19g4035 927 CDD GH31_MGAM_SI_GAA 303 683 - -
Amo19g4035 927 Pfam Galactose mutarotase-like 195 263 IPR025887 -
Amo19g4035 927 ProSitePatterns Glycosyl hydrolases family 31 active site. 456 463 IPR030458 -
Amo19g4035 927 Gene3D - 773 927 IPR013780 -
Amo19g4035 927 SUPERFAMILY Glycosyl hydrolase domain 688 768 - -
Amo19g4035 927 CDD GH31_N 185 303 - -
Amo19g4035 927 SUPERFAMILY Galactose mutarotase-like 32 291 IPR011013 GO:0003824|GO:0005975|GO:0030246
Amo19g4035 927 Gene3D - 671 770 IPR013780 -
Amo19g4035 927 SUPERFAMILY (Trans)glycosidases 294 686 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4035 Amo-Chr19 156457482 156461279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4035 21 925 Glycoside Hydrolase AT1G68560 71.162 0.0 1396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4035 K15925 - gmx:100816950 1553.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4035 19 156457482 156461279 Amo19g4035 19 156457482 156461279 ECH