Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3928 ATGGGGTGTGTAGCATCAAAACTAGAGGAAGAAGAAGAAGTGGTGTCCATGTGTAGAGAGAGAAAGAAGCAGTTAAAGTTAGCAGTGGACAAAAGATATGAACTTGCTGAGGCACATTGCAAGTACTTTCATTCTCTCTATGCTGTTGCTGCTTCCATTAAACTCTTTGTTGCACGCCATTCTTCTCCTTCTTCACCTTTCCTCATAACTTTCCCTCCTTCTTCTCCTCCTCCTCCTCCTCCTCCCTCTCAGAATGTGATAACCAACCCCATGTTCCTTCAACAGACTCCATCAGAGACAAAGCATGTTGAAGCCATTGCTGCTTCACCACCTTGTGGCTCATGCAATACTTCTTGTTCTGAGGAAGAGAGGGAGGACAAGGTTGAAGAAGAAGAAGCTCAATGTAAGAGAGAACAAGTGCAAGATGAACAACAGCAGCAGCAACAAGAACAAGAACAAGAACAGCAGCCATGTGAGTACTACTACATGCACATGCCTATGCCTATGTCTATGCCTATGGCAGCTTCAATGCCATCACCACAGAGGGATTTTGGGTGGGATTTCTTCAACCCTTTTGATGTTATGAGAACCAATGAGGTTATCAGTGGATACCGGGGGAACTCAGATGATGATTTGAGGGTGGTGAGGGAGGAGGAAGGGATTCCAGAATTAGAAGAAGAAGTACTAGAAAGAGAAGAAGAGGAAGAAGGAGAAGAGGAGGTTGTTGATGTGAGCAAGGTGGTGGTGAATGTTTTTGAAGAGAAGAAGAATAAGAAAAAGAAGAAGAGGAATAGTGCACGTGAGGAGCACGTGGTGAGTGAGAGTGTGAAGGGTGTGGATGAAGGTGAGCAGAGAGGGCTTGCTGTTCTTGAGACAGAAGGTGAAGGGAGAGAACTTCTTGAGGCTTTGAAGGACATTGAAGATCATTTTGTGAGGGCTTATGATTCTGGAAAGGATCTAACAAAGATGCTTGAGGCTAATAGGATTCCACTTCATTCTAGTTTGGATGAAATAAAAGAAAGTTCGACCAAACTTATTCAGGCAATAACATGGAAGTCCATGTCATCTAGGCCATCCTCATGCAAGAGTCTTGTGGTTTCGTATACGAAAAATTCATCAACTTGGGTGGAATATAAGAATGATCTCTTTGATGATTATGGTGGAATGGATTCAGGAAGTCATTTATTAACCTTAGGAAGGTTATATGAATGGGAAAAGAAGTTGTTTGAGGAGGTTAAGGCTGGAGATAACATCAGGAAAAATTATGAGAAAAAGTGTGCACAGTTGAGAAACAAAAATGTTAAAGGAGATGATGAAACTAGTATGGACAAAACGAAAGCTGCTGCGAAAGATCTATATGCTGGTATCTTGGTTGCAATACGTCGTGCAGAATCGATCTCAAAAAGAATTCAGAAAATGAGAGATGAAGAGTTACAGCCTCAAATTGTTGAACTATTGAAAGGTTTGACACAATCGTGGAAAGTTATGTTGGAATCCCATGAAACTCAGAAGATGATTCTTTCTGAAGTGAAGTCTTTCACATGTCCCACATTCGGGAAATTCTGCAATCAATCTCACCGGTTGGCGACTCTTCAGCTCGAAACACAGCTTCAAAACTGGCGAATGTGTTTTAGAGAGTACACTGCTGCTCAAAAGGCATATGTTGAAGCTCTTCACAGTTGGCTGAGCAAGTTTATAGTCCCAGAAGTTGAATTCTACTCGAGAAGCAAAGATGTACCCATGCCATATCATCAAGCCAATGGGCCACCACTACTTGTGATATGCAGCAATTGGTTAAATTCCCTGCAAAAGTTACCCGACAAAATGGTATCGCTTGCATTGAAAAGCGTGGCGAAGGATGTGAGAGCTCTTTGGCATCAGCAGGGTGAAGAGTTGCAGCAGAAAAGGAAAGTAGATAGCCTAGCCAAAGACTTGGAAAGAAGGTCGTTAAGTTTGCATAAAGATTCAAAGATGAAGTTGCTTGAGTTGCAAGTAATGGACCCGAAACCAGAGGCGGGAAGTAATCATGATCAAGATCAAGAAGAAAGCTTGATGGAGAAGAATGATGATCAGTTGGAGACACTGAGAAGAAAACTGGAGGTAGAGAAAGAGAAGCATCAAAGTTGCATGCAAGAAACACAAAGGATAACACTACGTGGATTGCAATCTGGATTCTCTTTGGTGTTTGAATCCCTAACCGAGTTCTCCAAAGCATCACAGAGAATGTACAATGAGCTTGTTGCTTGCAGTGAAAATGGTGACAAGGTTGGGAACATTGGGTATATAGAGGGTGATGGCTGCAATGCTGAAAATTGCAACAAAAATGGACAATAA 2334 0.4212 MGCVASKLEEEEEVVSMCRERKKQLKLAVDKRYELAEAHCKYFHSLYAVAASIKLFVARHSSPSSPFLITFPPSSPPPPPPPSQNVITNPMFLQQTPSETKHVEAIAASPPCGSCNTSCSEEEREDKVEEEEAQCKREQVQDEQQQQQQEQEQEQQPCEYYYMHMPMPMSMPMAASMPSPQRDFGWDFFNPFDVMRTNEVISGYRGNSDDDLRVVREEEGIPELEEEVLEREEEEEGEEEVVDVSKVVVNVFEEKKNKKKKKRNSAREEHVVSESVKGVDEGEQRGLAVLETEGEGRELLEALKDIEDHFVRAYDSGKDLTKMLEANRIPLHSSLDEIKESSTKLIQAITWKSMSSRPSSCKSLVVSYTKNSSTWVEYKNDLFDDYGGMDSGSHLLTLGRLYEWEKKLFEEVKAGDNIRKNYEKKCAQLRNKNVKGDDETSMDKTKAAAKDLYAGILVAIRRAESISKRIQKMRDEELQPQIVELLKGLTQSWKVMLESHETQKMILSEVKSFTCPTFGKFCNQSHRLATLQLETQLQNWRMCFREYTAAQKAYVEALHSWLSKFIVPEVEFYSRSKDVPMPYHQANGPPLLVICSNWLNSLQKLPDKMVSLALKSVAKDVRALWHQQGEELQQKRKVDSLAKDLERRSLSLHKDSKMKLLELQVMDPKPEAGSNHDQDQEESLMEKNDDQLETLRRKLEVEKEKHQSCMQETQRITLRGLQSGFSLVFESLTEFSKASQRMYNELVACSENGDKVGNIGYIEGDGCNAENCNKNGQ* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3928 777 Coils Coil 419 439 - -
Amo19g3928 777 MobiDBLite consensus disorder prediction 672 686 - -
Amo19g3928 777 MobiDBLite consensus disorder prediction 258 277 - -
Amo19g3928 777 Coils Coil 678 712 - -
Amo19g3928 777 Coils Coil 8 28 - -
Amo19g3928 777 PANTHER UNCHARACTERIZED 1 758 - -
Amo19g3928 777 MobiDBLite consensus disorder prediction 130 153 - -
Amo19g3928 777 MobiDBLite consensus disorder prediction 70 86 - -
Amo19g3928 777 Pfam Protein of unknown function (DUF632) 299 622 IPR006867 -
Amo19g3928 777 PANTHER OS09G0542500 PROTEIN 1 758 - -
Amo19g3928 777 Coils Coil 249 269 - -
Amo19g3928 777 MobiDBLite consensus disorder prediction 667 686 - -
Amo19g3928 777 Coils Coil 121 156 - -
Amo19g3928 777 MobiDBLite consensus disorder prediction 70 89 - -
Amo19g3928 777 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3928 Amo-Chr19 154998531 155001553 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3928 174 645 Acyl Lipid Metabolism Gene Families AT2G27090 31.380 1.04e-57 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3928 - - aip:107619782 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3928 19 154998531 155001553 Amo19g3928 19 154998531 155001553 ECH