Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3920 ATGTCACATGAAATGGAGTCCAATGGTTCTATTGAATATGTAGCTCTAGGAGGAGAAGGTTCCAGTGTAAATCTAGAGAAGTTCCAGAAGGTTCCAATCATACCACTAATCTTCTTGATCTTCTATGAGGTATCAGGTGGACCCTTTGGTGTGGAAGACACAGTAAGAGCAGCTGGTCCATTGTTAGCACTCATTGGTTTCTTGGTGTTCCCATTTATATGGAGTGTTCCTGAGGCACTAATCACTGCAGAAATGGGAACAATGTTTCCAGAAAATGGTGGCTATGTAGTTTGGGTTTCATCTGCATTGGGTCCTTATTGGGGTTTCCAATTGGGTTGGATGAAATGGCTAAGTGGTATCATTGACAATGCTTTATACCCAGTTTTGTTCTTGGATTATCTCAAATCAGCTATTCCAGCTTTGGAATCTGGTTTTCCAAGAATCATAGCAGTGTTAATCTTGACTTTAGCACTCACTTACATGAACTATAGAGGTTTAACAATTGTGGGTTGGATTGCTATATTTCTCGGAATCTTTTCGCTGCTTCCTTTCATGGTTATGGGAGTTATAGCAGTTCCAAGATTGAAGCCAAGAAGGTGGATCATGGTGGATTTGAAGAATGTGAATTGGGGTTTGTACTTGAACACATTGTTCTGGAATTTGAACTATTGGGACTCAATTAGTACTTTGGCAGGAGAAGTGGATGATCCTGAAAAAACTCTCCCAAGAGCACTATTCTATGCTGTGTTGTTGGTTGTGTTTGGATACCTTTTTCCTCTTTTGATTGGTACCGGCGCCGTTCCGGTGAACCCCGAGTTATGGTCCGATGGTTACTTCTCAGAAGTTGCAAGATTGATTGGAGGAGTTTGGTTGAGAATTTGGGTGCAAGCAGCATCTGCATTGTCAAATATGGGAATGTTTATGGCTGAGATGAGTAGTGACTCATTCCAGCTTCTTGGGATGGCAGAAAGGGGAATGCTTCCTGAGTTCTTTGCAAAAAGATCAAGTTTTGGGACACCCCTTATTGGGATTCTGTTCTCAGCTTCTGGGGTGATCTTGCTTTCATGGTTGAGCTTCCAAGAAATTGTTGCTGCTGAGAACTTCTTGTACTGTTTTGGCATGCTTATGGAGCTTGTTGCATTTGTGAAGTTGAGGATGAAGTTTCCAACTCTCAATAGGCCTTATAAGGTGCCTGTTGGGAGTAAAGGAGCAATTTTGATGTGTTTGGTGCCATCATTGCTAATATTTGTGGTTTTGGCATTCACAACATTCAAGGTTTTTGTTATCAGCATTTCAGCTGTGATGGTAGGGCTTGTGTTGAGGCCTTGTTTGAAATATGTGGAGCACAAAAGATGGCTTGAATTCTCTGTTAATTCTGATCTTCCAGATATTCAAACCACCTTATACTAG 1410 0.4135 MSHEMESNGSIEYVALGGEGSSVNLEKFQKVPIIPLIFLIFYEVSGGPFGVEDTVRAAGPLLALIGFLVFPFIWSVPEALITAEMGTMFPENGGYVVWVSSALGPYWGFQLGWMKWLSGIIDNALYPVLFLDYLKSAIPALESGFPRIIAVLILTLALTYMNYRGLTIVGWIAIFLGIFSLLPFMVMGVIAVPRLKPRRWIMVDLKNVNWGLYLNTLFWNLNYWDSISTLAGEVDDPEKTLPRALFYAVLLVVFGYLFPLLIGTGAVPVNPELWSDGYFSEVARLIGGVWLRIWVQAASALSNMGMFMAEMSSDSFQLLGMAERGMLPEFFAKRSSFGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCFGMLMELVAFVKLRMKFPTLNRPYKVPVGSKGAILMCLVPSLLIFVVLAFTTFKVFVISISAVMVGLVLRPCLKYVEHKRWLEFSVNSDLPDIQTTLY* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3920 469 PIRSF AA_transporter 25 465 - -
Amo19g3920 469 Gene3D Amino acid/polyamine transporter I 37 458 - -
Amo19g3920 469 PANTHER POLYAMINE TRANSPORTER PUT1 3 467 IPR044566 GO:0022857
Amo19g3920 469 PANTHER ACID PERMEASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 3 467 - -
Amo19g3920 469 Pfam Amino acid permease 38 425 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3920 Amo-Chr19 154947052 154948932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3920 7 467 Organic Solute Cotransporters AT1G31830 67.312 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3920 - - gmx:100806830 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3920 19 154947052 154948932 Amo19g3920 19 154947052 154948932 ECH