Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3461 ATGCCTCTGGTTCTGAAGAACAACCATGGCAGCTCCATATCCTCTGCTTCAAAACTCTTCCTTGTCTTCACACTCCTCTCCCTTCTCTCCATCCTTCTCTTCCTCACCTCCTCCTCCCCCTCCACCACTCTCACCGCCACTTCACAGCGCACTCTCTCTCTTCCATCCACCACTTCATTCATCAATGTCATGGTCGCTGACCTCCCCAGATCCCTCAACTACGGCCTCCTCAACAATTATTGGTCCCTCAGCTCCGATTCCCGACTCGGCAGCGACGCGGATCGCGAAATCCGATCGAAACAGCTTCGCGCCAAAACCCTAGACTTCCCACCGTACCCTGAGAACCCACTGATCAAGCAGTACAGTGCCGAGTACTGGATCATGGGGGATCTCATGACGCCCTATGAGAATCGATCCGGGTCCTTYGCAAGACGCGTTTTTGACGCACGTGATGCCGACGTCATCTTCGTCCCCTTCTTCGCCACCATCAGCGCTGAGATGCAGCTTGGGATTGCTAAAGGGTTGTTCAGGAAGAAGGACGTTGCCAATGAGGATTATGGGAGGCAGAGGGAAGTCTTGGATTTTCTTAAAAAAACCGAAGCTTGGAAGCGTTCTGGTGGAAGAGATCACGTGTTTGTGCTCACCGACCCAGTTGCAATGTGGCATGTTAAGGATGAAATTTCCCCAGCTATTCTCCTTGTGGTGGACTTTGGTGGTTGGTACAGACTTGACTCGAAGTCATCTAATTGTAGCTCGTCTGAAATGATTCAACACACCCAAGTTTCTGTAATTAAAGATGTTATTGTGCCGTACACACATCTACTTCCGAGGTTGCAGCTGTCAGAAAACCAGGAGCGCCATAGCCTTTTGTATTTCAAAGGAGCAAAACATAGGCACCGGGGTGGCTTAGTTAGAGAGAAGTTATGGGATCTATTGGTTAATGAGCCTGGTGTTATAATAGAGGAAGGCTTCCCGAATGCCACTGGGCGAGAGCAATCAATTAGGGGGATGAGATCATCCGAATTTTGCTTGCATCCAGCTGGGGATACACCCACTTCGTGCCGACTATTTGATGCCATTCAAAGTCTTTGTATACCTGTTATTGTCAGCGACAACATCGAACTCCCATTTGAAGGCACGGTGGATTATACGGAATTTTCAGTTTTCGTGGCGGTTGCCGATGCGCTGAAACCAAGCTGGTTAGTCAATCATCTCAAAAGCTTTTCGAAACAACAGAAAGACAGGTTTCGCCAAAACATGGCTCAGGTACAACCCATTTTTGTCTATGATAATGGTCATCCAGGTGGCATTGGACCAATACCTTTGGACGGTGCAGTGAATCATATCTGGAAGAAAGTTCATGAAAAGCTTCCCATAATTAAGGAAGCTATAATTCGCGAAAAAAGAAAACCTATTGGTGTTCTTGTTCCACGTAGGTGTCAATGTACTTGA 1452 0.4787 MPLVLKNNHGSSISSASKLFLVFTLLSLLSILLFLTSSSPSTTLTATSQRTLSLPSTTSFINVMVADLPRSLNYGLLNNYWSLSSDSRLGSDADREIRSKQLRAKTLDFPPYPENPLIKQYSAEYWIMGDLMTPYENRSGSFARRVFDARDADVIFVPFFATISAEMQLGIAKGLFRKKDVANEDYGRQREVLDFLKKTEAWKRSGGRDHVFVLTDPVAMWHVKDEISPAILLVVDFGGWYRLDSKSSNCSSSEMIQHTQVSVIKDVIVPYTHLLPRLQLSENQERHSLLYFKGAKHRHRGGLVREKLWDLLVNEPGVIIEEGFPNATGREQSIRGMRSSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGTVDYTEFSVFVAVADALKPSWLVNHLKSFSKQQKDRFRQNMAQVQPIFVYDNGHPGGIGPIPLDGAVNHIWKKVHEKLPIIKEAIIREKRKPIGVLVPRRCQCT* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3461 483 Pfam Exostosin family 59 404 IPR040911 -
Amo19g3461 483 PANTHER EXOSTOSIN FAMILY PROTEIN 17 473 - -
Amo19g3461 483 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 17 473 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3461 Amo-Chr19 148150796 148153369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3461 - - adu:107467786 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3461 19 148150796 148153369 Amo19g3461 19 148150796 148153369 ECH