Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3456 ATGGGTGGTATTTGCTCAAAGTCATGGAAAGCCACTGTGGATGGTGTAGCTGTAAATAATGCTCTTATTAGCGAAGGCTCGTCGTCGAGACATGCTAATGGCCATGTTAATAATGAGCCTGCAATGACTTATCAGTCTATTGGACTTCCTGCAAATAGTATAGATAGCAGCAATTCAAATGTTCCCCCACTTGTTGATGATGATGAGTTGGAAAAGCATGAAAGGGAATCATTTTCCTTTTCTGGGATGGAAAAGGTATCATATGGGTCCGGTGCATATGATATCAATGACGGAATTCCTGCTCTATCTAGAGCTTTATCACATAAGTCCAGATCAGCCAAGTCCAAGCAGGCTGCTGCAAAGGTTTCGGAAGTGAGTTCACTTTTGGGCAGAGCTGGTACAGCTGGGCTTGGCAAGGCGGTAGAAGTTTTGGATACGTTAGGTAGTAGTATGACAAGTTTGAATCTCAGTAGTGGTTTTACATCAGGCATGACAACAAAAGGAAATAAAATTTCAATTTTGGCCTTTGAAGTCGCAAATACAATTGTTAAGGGTGCCAACCTGATGCAATCTCTTTCAAAAGAGAACATTAGACATTTGAAAGAAGTTGTTCTGCCATCTGAAGGAGTGCAAAATTTGATATCCAAAGATATGGATGAACTCCTAAGAATTGCTGCAACAGACAAAAGAGAAGAATTGAAAATCTTTTCTGGTGAAGTTGTACGTTTTGGAAACCGTTGCAAAGATCCTCAGTGGCACAACCTTGATCGTTACTTTGAGATGTTAGGTTCAGAGCTTACACCACAAAGGCAATTGAAAGAGGAGGCAGAAATAGTGATGCAGCAACTAATGACACTTGTTCAATGTACAGCTGAGTTATATCATGAATCAAATGCCTTGGACAGATTTGATCAAGATTACCGGCGCAAGCTTCAAGAAGAGGACAATTCAAATACCACACAAAGAGGAGACAGCCTTGCAATTTTAAGAGCAGAATTGAAGAGTCAAAAGAAGCATGTGAGAAATTTGAAGAAAAAATCACTGTGGTCCAGGATTTTGGAAGAGGTAATGGAAAAGCTTGTAGACATTGTGCATTTTCTACATTTGGAGATACACGAAGCATTTGGCAGTGCTGACAATGATCAGCCAGTAGAAGAGTCTCCGGGCAACTCGATGAAGTTGGGGTCTGCTGGTCTTGCTTTGCATTATGCAAATATTATCACCCAAATTGATACTCTTGTGTCTCGTTCGAGTTCCGTGCCTCCCAATACAAGGGATGCCTTATATCAAGGGCTACCACCTAATGTAAAATCGGCATTGCGATCAAGACTACAGTCATTTCAACTCAAGGAAGAGCTTACAGTCCCACAAATCAAAGCTGAAATGGAGAAAACTTTGCAGTGGCTTGTGCCTATTGCTACCAATACAACAAAAGCTCATCATGGCTTTGGATGGGTTGGAGAATGGGCAAATACAGGGTCTGAGGTCAACCGTAAACCTGCGGGTCAGACGGACTTATTAAGAATCGAGACACTACACCATGCCGATAAGGACAAAGCAGAAGCTTACATTCTTGAACTTGTTGTCTGGCTCCATCATCTTGTCAGCCAAGTCAGAGCTGGTAACGGAGTTAGGTCTCCAGTCAAGTCTCCGATTCGTTCTCCAACGCAAAACACAGGACAATTATTTACACAGAAAGCCTGCTCCAATTCTCCCATATTAACAGTAGAAGATCAGCAAATGCTTAGAGACGTCGGCAAGAGAAAACTGACACCAGGAATCAGCAAGAGTCAGGAATTCGGCATAGCCAAGACTAGGTTGAGCAAGCACCATAGGCTGAGCAAGAGTAGTAGTCATTCTCCAATAAGTGAAAGTAGTAGTAAGAATGACATATTCTCTTCTACTTCAACAAGGAGGCTACCTTCAATTCCTTTTATTGACTTTGACATTGATAGAATGAAGGCCTTGGATGTCATTGATAGGTTGGATACAATTAGGAGTTCATAG 2007 0.4175 MGGICSKSWKATVDGVAVNNALISEGSSSRHANGHVNNEPAMTYQSIGLPANSIDSSNSNVPPLVDDDELEKHERESFSFSGMEKVSYGSGAYDINDGIPALSRALSHKSRSAKSKQAAAKVSEVSSLLGRAGTAGLGKAVEVLDTLGSSMTSLNLSSGFTSGMTTKGNKISILAFEVANTIVKGANLMQSLSKENIRHLKEVVLPSEGVQNLISKDMDELLRIAATDKREELKIFSGEVVRFGNRCKDPQWHNLDRYFEMLGSELTPQRQLKEEAEIVMQQLMTLVQCTAELYHESNALDRFDQDYRRKLQEEDNSNTTQRGDSLAILRAELKSQKKHVRNLKKKSLWSRILEEVMEKLVDIVHFLHLEIHEAFGSADNDQPVEESPGNSMKLGSAGLALHYANIITQIDTLVSRSSSVPPNTRDALYQGLPPNVKSALRSRLQSFQLKEELTVPQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSEVNRKPAGQTDLLRIETLHHADKDKAEAYILELVVWLHHLVSQVRAGNGVRSPVKSPIRSPTQNTGQLFTQKACSNSPILTVEDQQMLRDVGKRKLTPGISKSQEFGIAKTRLSKHHRLSKSSSHSPISESSSKNDIFSSTSTRRLPSIPFIDFDIDRMKALDVIDRLDTIRSS* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3456 668 PANTHER OS01G0873900 PROTEIN 1 667 IPR045021 GO:0045927
Amo19g3456 668 Pfam Domain of unknown function (DUF3475) 173 229 IPR021864 GO:0045927
Amo19g3456 668 Pfam Protein of unknown function (DUF668) 394 478 IPR007700 GO:0045927
Amo19g3456 668 PANTHER - 1 667 - -
Amo19g3456 668 MobiDBLite consensus disorder prediction 618 635 - -
Amo19g3456 668 Coils Coil 326 346 - -
Amo19g3456 668 MobiDBLite consensus disorder prediction 605 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3456 Amo-Chr19 148080211 148087296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3456 - - adu:107467842 1246.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3456 19 148080211 148087296 Amo19g3456 19 148080211 148087296 ECH