Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3443 ATGTCGAGCGATAGCGACGAGGATGCTCTCATCTTGAAAGCGCTGCAGGAGCAAGAAAAGCGCGATGTTAACTACGGCAAACCCTCCTCCAATTCCCGTAAGCCCGTCGCCAATTACGTCCAGGCTCCTAAGCGCGGCGGAGCTCCGGCCGCCGCCAAGCAGGCGCAGAGCAAAGGTCGTGTGGCCGAGGACGATGACGACTCCGAAGTCGAGATGCTCAGCATATCCAGCGGCGAAGAGGACAACGCCAGAGCTCCGGCTGCCGCTGCCAAGGGTCGCGGAAGGCCGGGAGCTCGAGACAACGAACGCGCTTGGGACGGCGAAGAGCCTAGTTGCTGGAAGCACGTCAATGAAGCTGACCTTGCTCGCAGGGTTCGAGCGATGAGGGAATCAAGGATAGCACCAGTGGCTCAGAAATACGAGAATAAAGCCACTGCGGCAGGAGGTCCTAGAAAGGGGCTCAATTACACGCAGTCTTTTCCTCGTGGCATGGAATGTGTCGATCCACTGGGTTTGGGGATCATAGACAACAGAACACTAAGGTTGATCACCGAGTATTCAGAGAGTTCTCACAATGTTGACAATGAAGAGCAGGATCCCAACCTTCGAGAGAAATTGCTTTATTTTTCCGAGAACTTCGATCCAAAGCTGTTCTTATCACGAGTACATGCTAAAACAAAAACTGAAGATCTGGTAGCTGGTGCACGTGCTTTGAAAGCTGATTTCCAAAGTCGTACCGAGCAGAAAAAGCAGCTGGTTAAGGATAACTTTGACTGCTTTGTCTCTTGCAAAACCACAATTGATGATATTGAATCAAAGTTAAGAAGAATTGAGGATGATCCTGAAGGATCTGGGACCTCCCATTTGCATAGTATTATTCAAGGAGTTAATTTGCAAGCTAATCGTGCTTTGAAGCCTTTGTTTGAGAGACAAGCTCAAGCCGAAAAAATTAGGACTGTCCAAGGAATGCTGCAGAGATTCCGAACCCTTTTCAACTTACCAAGTACTATCCGTGGTAGCATTAGCAAGGGGGAATTTGATTTGGCAGTCAGGGAGTACAAGAAGGCCAAGTCAATTGCTCTTCCTTCTCATATTCAGGTGGGGATCCTAAAACGTGTTCTCGAAGAAGTTGAAAAAGTGATGAATGAGTTCAAGGCAATGCTTTTCAAATCTATGGAAGATCCGGAAATAGATCTAACAAGTCTTGAGAATACTGTGAGGTTGCTGTTGGATTTGGAACCAGAGTCTGATCCAGTCTGGCATTATTTGAATATACAGAATCAGAGAATCCGAGGTTTGCTTGAGAAGTGTACATCAGATCATGAGGTCAGAATGGAACATCTGAAGAAGGAATTGCATGAAAGGGCTCTTTCTGATGCTAGGTGGAGGAAGATTCAAGATGAATTGGGTGAATCTTCAGATATCAACAGCTCTCCTATTGTTGGTAATACCCAATCTCATCTGGTAGATCTAACTGGTGAAGAGGTTGATGCTCTAAGAGGAAAGTATATCCGTAGATTAACTGCTGTAATCATCCGCCACATACCAGCCTTCTGGAAGGTTGCACTCTCTGTTTTCAGTGGAAAATTTGCTAAGTCTTCACAAGTTCCAACAGATTCAAATACCAACAGTTCTGCTAATAGAGTTGAAGAAAAAGCTGGAGACACAAAATACTCAAGTCATTCTATGGATGAAGTTTCTGCAATGATATGCAGCACAATTTCGGTTTATGGAGACAAGGTTATTACCATCTTTAGTGATCTAGAGGAATCAAATGTCCTCCAGTCCTACATGAGTGATGCCATAGAAGATATATCTAAAGCATGTGTAGCTTTTGAAATGAAGGAAGCTGCTCCTCAGATTGCTGTTGGTGCTCTGCGATCACTGCAATCAGAGATTACAAAGATTTATGTTCTGAGGCTTTGCTCTTGGACGCGAGCATCAGTTGAAGAGATCTCAAAGAATGTGACATGGGTTATTGTTTCTATTCTTGAACGGAACAAATCACCTTACGCAATCTCATACTTGCCTTTAACATTCCGTTCAATTATAGCTTCAGCGTTGGATCAGATAAATACGATGCTTCTGTCCTTGAGGAACGAGGCAACAAAGTCAGAGGATACATTTATACAACTTCAGGAAATTCAAGAATCTGTCAGATTGGCATTTTTAAACTGCTTCCTTGATTTTGCTGGTAATTTAGAGCGTATTGGAATTGAGATTGGCCAAAATAGATCAGACATAGAAGGTTCCCAGTTAACAAACGGATATTCCCATGAACTAGAACAAAATGCAGCTGATGGTGTTACCGATCCACATCAACAATTATTGATTGTTCTAAGTAATATTGGATATTGCAAAGATGAACTTTCGTATGAATTGTATGAGAAATATAAACATATCTGGCAGCATTCCAGAGGGAAGGATGAGGCAAACGGTGATGATGTACAAGATCTTATGATTTGTTTCTCAGGACTTGAAGAGAAGGTCCTTGAACAATATACTTTTGCAAAGGCAAACTTGATCAGGTCTGCTGCCATGAATTATCTGTTGAACTCTGGCATTAATTGGGGAGCTGCACCTGCAGTTAAAGGCGTTCGTGATGCTGCAGTGGAGTTATTGCACACATTGGTAGCTGTGCATGCAGAGGTTTTTGCTGGTGCTAAACCCCTGTTGGATAGAACACTTGGCATCCTTGTGGAAGGTTTGATTGATACATTCATCAGCATTTTTCATGAAAACGAAGATAAGGATCTCGGAGCACTTGATGCAAATGGATTTTGTCAGCTCATGCTTGAGCTTGACTACTTTGAGTCCATATTAAACCCATATTTTACGTCTGATGCAAGAGATTCTTTGAGGTCGCTACAAGGTTTGCTTTTAGAGAAAGCCACCGAGAGTGCATCTGATGTTGATAATCCAGGGCATACTCGTCGGCCCACTCGGGGAAGTGAAGATGCAGTTGCAGACGATAAACCACAAGGAACAAATGTATCACCAGATGAACTCATTGCTCTTGCGCAGCAATGTAGCTCTGAGTTTCTTCAACCAGAGCTTGAGCGGACACGCATTAACACAGCATGCTTTCAATAA 3093 0.4374 MSSDSDEDALILKALQEQEKRDVNYGKPSSNSRKPVANYVQAPKRGGAPAAAKQAQSKGRVAEDDDDSEVEMLSISSGEEDNARAPAAAAKGRGRPGARDNERAWDGEEPSCWKHVNEADLARRVRAMRESRIAPVAQKYENKATAAGGPRKGLNYTQSFPRGMECVDPLGLGIIDNRTLRLITEYSESSHNVDNEEQDPNLREKLLYFSENFDPKLFLSRVHAKTKTEDLVAGARALKADFQSRTEQKKQLVKDNFDCFVSCKTTIDDIESKLRRIEDDPEGSGTSHLHSIIQGVNLQANRALKPLFERQAQAEKIRTVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHIQVGILKRVLEEVEKVMNEFKAMLFKSMEDPEIDLTSLENTVRLLLDLEPESDPVWHYLNIQNQRIRGLLEKCTSDHEVRMEHLKKELHERALSDARWRKIQDELGESSDINSSPIVGNTQSHLVDLTGEEVDALRGKYIRRLTAVIIRHIPAFWKVALSVFSGKFAKSSQVPTDSNTNSSANRVEEKAGDTKYSSHSMDEVSAMICSTISVYGDKVITIFSDLEESNVLQSYMSDAIEDISKACVAFEMKEAAPQIAVGALRSLQSEITKIYVLRLCSWTRASVEEISKNVTWVIVSILERNKSPYAISYLPLTFRSIIASALDQINTMLLSLRNEATKSEDTFIQLQEIQESVRLAFLNCFLDFAGNLERIGIEIGQNRSDIEGSQLTNGYSHELEQNAADGVTDPHQQLLIVLSNIGYCKDELSYELYEKYKHIWQHSRGKDEANGDDVQDLMICFSGLEEKVLEQYTFAKANLIRSAAMNYLLNSGINWGAAPAVKGVRDAAVELLHTLVAVHAEVFAGAKPLLDRTLGILVEGLIDTFISIFHENEDKDLGALDANGFCQLMLELDYFESILNPYFTSDARDSLRSLQGLLLEKATESASDVDNPGHTRRPTRGSEDAVADDKPQGTNVSPDELIALAQQCSSEFLQPELERTRINTACFQ* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3443 1030 MobiDBLite consensus disorder prediction 533 558 - -
Amo19g3443 1030 MobiDBLite consensus disorder prediction 16 106 - -
Amo19g3443 1030 Pfam Exocyst complex component Sec5 168 1029 IPR039481 -
Amo19g3443 1030 PANTHER EXOCYST COMPLEX COMPONENT SEC5 1 1029 - -
Amo19g3443 1030 SUPERFAMILY Cullin repeat-like 321 441 IPR016159 -
Amo19g3443 1030 PANTHER EXOCYST COMPLEX COMPONENT SEC5 1 1029 IPR029175 GO:0000145|GO:0006893
Amo19g3443 1030 MobiDBLite consensus disorder prediction 965 999 - -
Amo19g3443 1030 MobiDBLite consensus disorder prediction 533 549 - -
Amo19g3443 1030 MobiDBLite consensus disorder prediction 972 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3443 Amo-Chr19 147774333 147789753 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3443 K17637 - gmx:100794090 1605.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3443 19 147774333 147789753 Amo19g3443 19 147774333 147789753 ECH