Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3403 ATGGGAGACCGCAGAAAAAAGCACCGTCGTCTACCCGACTCCCCCACCTCTTCATCCCAATCTGAATCCGACACTGAATCCGACTCCCAATCTGAATCTGAATCCGACTCCGATCGCCCTTCCAGGCGCCGCGGCCGAAGCCGCCGCGAAAAGGACCGCCGCAGGCGGAAGGAGAAGGAGGACGAGGAGCGCAGGAGGAGAAGGAAGAAGAAGGAGAAAAAGAAGAAGAGGAGGGATAGAGACATGAAATCCAGGAAAAGTAACAAGAGGCTCCGTGATTCTGATGCTTCTGAATCTTCGGATGAGGATGAAGAGAGGTCACCTAGGGTTGAGCCTCATGCTGTGGTCCGTGAAATCATGATCGAGTTCCCCAATGTTGCCACTGATTTGAAGCAGCTCTTGCAAATGATTGATGATGGACAAGCCGTTGATATAAAGGGTATATCAGAAGAATCTCTCATGAAGCATCTGAAGAAGCTGTTCCTATCACTAAAGCTGAAGGAAAATGGAGATAGAGTTTTCTTACTTCCTTCTAAAGCTCACCCCACTTTGGATGTTGTTGGCCCTATAATTCACTCTTTTATGGATCCTATGAAGGAGCAAGCTGATGCTTCTGCAGCGATACCTGAAACAAGTTCAGTTCCAGTAGATGCAGGGAGTGAGCAGGTGGCAAATGAGCACATAACAGGAAATCCAGATGATAATTCTCCTGGTCCTAGAAAAAGGATGATTGGTCCTGCAATGCCATCTGCTGAGTTACTTGCTGCTGCCGCCAAATTAACAGAAGCACAGACTGAGCTTAATGAAGCTGAGTTGGACGACGATACTGAACTATTTGTGGGACCTCCACCACCTGCTATGGTTTCTGAAGCAGAATCAGCTAATGAAGCAGAGCGTTTTGAAGAGGTCACCAGGATCATGGAAGTTGAGGCTGACAGCCCATATGATGTTCTAGGAGTTAACCATAATATGTCTAGTGATAACATAAAGAAAAGGTATTGGAAGATGTCACTTTTGGTTCATCCAGATAAATGCTCTCATCCTCAAGCCCATCAAGCATTTATTAAGTTAAATAAAGCTTTCAAAGAGTTACAGGATCCAGAAAAGCGGAAAGCAATGGATGAGAAGATCAAGCTCAAGGAAGAACAGGAGCAGTTTAAGGTTGAACTTAAAGCTATGCGTGAGGCTGCACTTTGGAGAAGAACGCAAGGTATATCAATGGAGGGCGATGATGAGCTTCTGGCACAGACAGAGGTTAAAGTGGAGCCAAAAAGAGATGAATGGATGACAACATTGCCTCCAGAGAGGAAAGTAAGTCTTGTGAATTATTTGATAAAATATATAGTTAAATATTGA 1356 0.4506 MGDRRKKHRRLPDSPTSSSQSESDTESDSQSESESDSDRPSRRRGRSRREKDRRRRKEKEDEERRRRRKKKEKKKKRRDRDMKSRKSNKRLRDSDASESSDEDEERSPRVEPHAVVREIMIEFPNVATDLKQLLQMIDDGQAVDIKGISEESLMKHLKKLFLSLKLKENGDRVFLLPSKAHPTLDVVGPIIHSFMDPMKEQADASAAIPETSSVPVDAGSEQVANEHITGNPDDNSPGPRKRMIGPAMPSAELLAAAAKLTEAQTELNEAELDDDTELFVGPPPPAMVSEAESANEAERFEEVTRIMEVEADSPYDVLGVNHNMSSDNIKKRYWKMSLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDEKIKLKEEQEQFKVELKAMREAALWRRTQGISMEGDDELLAQTEVKVEPKRDEWMTTLPPERKVSLVNYLIKYIVKY* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3403 451 MobiDBLite consensus disorder prediction 1 111 - -
Amo19g3403 451 Coils Coil 369 396 - -
Amo19g3403 451 PRINTS DnaJ domain signature 349 369 IPR001623 -
Amo19g3403 451 PRINTS DnaJ domain signature 333 348 IPR001623 -
Amo19g3403 451 PRINTS DnaJ domain signature 315 333 IPR001623 -
Amo19g3403 451 SUPERFAMILY Chaperone J-domain 288 371 IPR036869 -
Amo19g3403 451 MobiDBLite consensus disorder prediction 86 111 - -
Amo19g3403 451 ProSiteProfiles dnaJ domain profile. 313 377 IPR001623 -
Amo19g3403 451 Coils Coil 59 79 - -
Amo19g3403 451 Gene3D DnaJ domain 294 397 IPR036869 -
Amo19g3403 451 CDD DnaJ 314 366 IPR001623 -
Amo19g3403 451 MobiDBLite consensus disorder prediction 68 85 - -
Amo19g3403 451 Pfam DnaJ domain 314 374 IPR001623 -
Amo19g3403 451 Coils Coil 253 273 - -
Amo19g3403 451 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 439 - -
Amo19g3403 451 SMART dnaj_3 312 369 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3403 Amo-Chr19 147150101 147154078 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3403 - - aip:107618276 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3403 19 147150101 147154078 Amo19g3403 19 147150101 147154078 ECH