Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2355 ATGGCATCATCATCATCATCATCATATATTGTGGCCACTTTATCACCTAATAACTCTCTACTTTTCTCACAAACCAGACTCACTGGTGCTAACTGGGTTCATTTTCCATCAACTAGTAGGAGGAGAGTAGGTAGGGTAAGAGCAGAGACTGAAAGTATGGCTACTGTCACAGAGAAACTTGGCATCAAGGTTGAGAGGAACCCTCCTGAGACAAAACTCACTGAACTTGGTGTCAAGCAATGGCCTAAATGGGGTTGCCCTCCAAGCAAATTCCCATGGACATATGAAGCCAAAGAGACTTGCTATCTTTTGGAAGGGAAGGTGAAGGTTACACCAAGTGGGGCAGATGAGTCAGTTGAGATTGGCGCCGGTGACTTGGTTGTGTTTCCAAAAGGGATGAGTTGCACTTGGGATGTGTCTGTTGGTGTAGACAAGCACTACAAATTTGAGTAA 453 0.4481 MASSSSSSYIVATLSPNNSLLFSQTRLTGANWVHFPSTSRRRVGRVRAETESMATVTEKLGIKVERNPPETKLTELGVKQWPKWGCPPSKFPWTYEAKETCYLLEGKVKVTPSGADESVEIGAGDLVVFPKGMSCTWDVSVGVDKHYKFE* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2355 150 SUPERFAMILY RmlC-like cupins 69 147 IPR011051 -
Amo19g2355 150 CDD cupin_TM1112-like 81 149 - -
Amo19g2355 150 Pfam EutQ-like cupin domain 74 147 IPR008579 -
Amo19g2355 150 PANTHER OS04G0445200 PROTEIN 40 150 - -
Amo19g2355 150 Gene3D Jelly Rolls 48 149 IPR014710 -
Amo19g2355 150 PANTHER OS04G0445200 PROTEIN 40 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2355 Amo-Chr19 107736676 107738010 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2355 K06995 - gmx:100499968 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2355 19 107736676 107738010 Amo19g2355 19 107736676 107738010 ECH
Amo19g2355 19 107736676 107738010 Amo09g1944 09 81754797 81757578 hybridization