Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2354 ATGGCAGGCTCAAATGATCCATTAGTGATAACATTCGGCGAGATGCTCATCGATTTTGTTCCGGACACAGCCGGAGTCTCCTTGGCTGAGTCTCGTGCCTTCATCAAAGCCCCCGGAGGTGCCCCTGCCAATGTTGCTTGTGCCATTTCCAAACTTGGTGGTAACTCTGCCTTCGTTGGCAAGGTGGGAGATGATGAATTTGGAAAGATGCTAGTTGACATATTGAATCAAAATGGGGTGAACACAGATGGTGTGTGCTTTGATAGGGAAGCAAGAACTGCATTGGCATTTGTGACACTGAGAAAGGATGGAGAGAGGGAATTCATGTTCTACAGGAATCCCAGTGCTGATATGATGCTGAAGGAGTCTGAGTTGAACATTGGTTTGATCAAGAAGGCTAAGATATTTCATTATGGATCCATTAGCCTCATATCAGAGCCTTGCAGATCAGCACACTTGGCAGCCATGAAAGCTGCTAGAGAAGCCGGTGCTTTGCTTTCTTATGATCCAAATGTGAGGCTCCCTTTGTGGCCTTCTCCTGATACTGCTAGGTCTGGAATCAAGAGCATTTGGTTTGATGCTGATTTCATCAAGGTTAGTGATGATGAAGTTAACTTTCTTACACAAGGAGATGCTGAGAAGGAAGAAGTTGTTATGTCCCTCTGGCATGACAAACTGAAGTTGCTTCTTGTCACTGATGGAGAGAAGGGTTGCAGATATTTCACCAAGAAATTTAAAGGAAGGGTAACAGGGTTCTCAGTTAAGCCAGTTGATACCACTGGTGCTGGTGATTCTTTTGTTGGTTCTTTTCTCGCATCTGTGGCCCGGGACTCTTCCATATTTGATAAGGAGCAAAATTTGAGAGAGGCTTTGACATTTTCCAATGCTTGTGGAGCAATATGTACAACACAGAAGGGAGCAATTCCAGCACTTCCGACCCGCTCAGAAGCTGAGAAATTTATCTCTGGCAATAAAGGCAATTAG 984 0.4482 MAGSNDPLVITFGEMLIDFVPDTAGVSLAESRAFIKAPGGAPANVACAISKLGGNSAFVGKVGDDEFGKMLVDILNQNGVNTDGVCFDREARTALAFVTLRKDGEREFMFYRNPSADMMLKESELNIGLIKKAKIFHYGSISLISEPCRSAHLAAMKAAREAGALLSYDPNVRLPLWPSPDTARSGIKSIWFDADFIKVSDDEVNFLTQGDAEKEEVVMSLWHDKLKLLLVTDGEKGCRYFTKKFKGRVTGFSVKPVDTTGAGDSFVGSFLASVARDSSIFDKEQNLREALTFSNACGAICTTQKGAIPALPTRSEAEKFISGNKGN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2354 327 Pfam pfkB family carbohydrate kinase 8 313 IPR011611 -
Amo19g2354 327 PANTHER FRUCTOKINASE-5-RELATED 4 323 - -
Amo19g2354 327 Gene3D - 6 326 IPR029056 -
Amo19g2354 327 PANTHER HEXOKINASE FAMILY MEMBER 4 323 - -
Amo19g2354 327 SUPERFAMILY Ribokinase-like 9 321 IPR029056 -
Amo19g2354 327 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 39 63 IPR002173 GO:0016773
Amo19g2354 327 CDD bac_FRK 8 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2354 Amo-Chr19 107730901 107733691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2354 K00847 - gmx:100791294 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2354 19 107730901 107733691 Amo19g2354 19 107730901 107733691 ECH
Amo19g2354 19 107730901 107733691 Amo09g1943 09 81748188 81750919 hybridization