Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2348 ATGAGGCCACAAAAACTCAAGTTGCTGCTAGCATCATTGTTGTTGCTTATTGTTGCGCAATGTTGTTCCAACACAAAAGCTTCTCTCCTTCCTTTGATAGATCCTCCCACCTCTCTCTTATCTGACCTCTGGCCGGACCCGTTCCGAGTGCTGGAGCAAGTACCATTCGGGGTAGGCGGCAGGGACGAGCAAGCGGCGATGGCGCTCTCGCCGGCGAGAGTAGACTGGAAGGAGACTCCGGAGGGTCACGTGATCATGCTGGACGTGCCGGGGCTGAAGAGAGACGAGATTAAGATCGAGGTTGACGAAGGAAGGGTGCTGCGAGTGAGCGGAGAGCGCAAGAGGGAGGAAGAAAGGAAGGGAGATCACTGGCATAGGGTTGAGAGGTCATATGGAAAGTTCTGGAGGCAGTTTCGGATGCCGGAGAATGTTGACTTGGATTCTGTTAAGGCGAAGCTTGACAACGGTGTGCTTACTTTGATTCTTGATAAGTTGTCACCTGATAAGATCAAGGGTCCTAGGGTGGTTACCATTGCTCCTGGGGAGTCTGAGGGTGAGGGTCCCGCCAAACTCGACAACAGTGGCGCCAAGCGTCAAGAGCTTTGA 606 0.533 MRPQKLKLLLASLLLLIVAQCCSNTKASLLPLIDPPTSLLSDLWPDPFRVLEQVPFGVGGRDEQAAMALSPARVDWKETPEGHVIMLDVPGLKRDEIKIEVDEGRVLRVSGERKREEERKGDHWHRVERSYGKFWRQFRMPENVDLDSVKAKLDNGVLTLILDKLSPDKIKGPRVVTIAPGESEGEGPAKLDNSGAKRQEL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2348 201 Gene3D - 35 178 IPR008978 -
Amo19g2348 201 SUPERFAMILY HSP20-like chaperones 62 175 IPR008978 -
Amo19g2348 201 MobiDBLite consensus disorder prediction 177 201 - -
Amo19g2348 201 CDD ACD_ScHsp26_like 73 164 - -
Amo19g2348 201 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 63 181 IPR002068 -
Amo19g2348 201 Pfam Hsp20/alpha crystallin family 75 178 IPR002068 -
Amo19g2348 201 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 15 185 - -
Amo19g2348 201 ProSiteProfiles CS domain profile. 69 176 IPR007052 -
Amo19g2348 201 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 15 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2348 Amo-Chr19 107622913 107623798 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2348 K13993 - gmx:100500319 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2348 19 107622913 107623798 Amo19g2348 19 107622913 107623798 ECH