Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2345 ATGGAAGTGGCAAGTGCTGTTCGTTCTTCACTTTTATTTCTGAGATTGCAAACACACTCTCCCTCACACCTTCAAAGACTCAGCAGCACTAGTGCCCATTTCTTCGCCTCAGCAAAAAGAAGAACAAGAACAACTAGCAGGCTTCATCATGCTCCTGCTTCTTTTCACCAAACTAGTAATTTCGTCGTCAACTCCTCCACTTCTTCTTCTACTACAGCAGAACCTGCTGCTTCTGGAACCTTTTCTGAGGTAGAAAGGATTAAGAACAAGTGCCTCAAATGGCAATGGAAGGGTCAGTATTCCATTAACTACTTCGCATCCCCTGATGATGATGATTCATCTGATGAGGAGTACCCTCCTTTGCTACTTGTCCATGGATTTGGTGCCTCTATTCCTCACTGGCGCAGGAATATAAACACACTGTCCCAGAATTATACTGTCTATGCCATTGATCTTCTTGGTTTTGGTGCTTCCGAGAAGCCACCAGGCTTTTCATATACCATGGAAACATGGGCTGAGTTGATCCTGGATTTCTTGGAGGAAGTCATTAAGAAGCCAACTGTACTAATCGGAAACTCTGTTGGAAGTCTTGCTTGTGTCATTGCAGCCTCAGATTCAAGTCAAAAACTTGTTAGAGGGATTGTGCTGTTAAACTGTGCTGGTGGCATGAACAACAAAGCAATTGTTGATGACTGGAGGATTAAGTTAGTCTTACCATTGCTTTGGCTGGTTGATTTTTTATTGAAGCAAAAGGGAATCGCCTCAGCCATTTTCGAGCGTGTTAAACAGAGAGAAAATTTGAAGAACATTCTGAGTTCAGTGTACGGCGATAAGGAGTCTGTGGATGAAGAACTGGTGGAGATCATTAGGGAACCGGCAAACGATGAAGGAGCATTAGATGCATTTGTATCGATCGTAACAGGGCCGCCGGGGCCGAACCCGGTGCAGTTGATGCCGAAAATCTCGGTGCCGGTCTTACTTCTGTGGGGAAATGAAGATCCTTTCACTCCACTTGATGGACCTGTTGGAAAGTACTTTTCTTCATTGGCTTCTGAAAAGGAAAATGTGAAACTGTGTGTACTTGAAGGGGTTGGACATTGTCCTCATGATGATAGACCTGAATTAGTCCATGAAAAATTGCTTCCCTGGTTAGCCAATCTTTCAGATTCATAG 1173 0.439 MEVASAVRSSLLFLRLQTHSPSHLQRLSSTSAHFFASAKRRTRTTSRLHHAPASFHQTSNFVVNSSTSSSTTAEPAASGTFSEVERIKNKCLKWQWKGQYSINYFASPDDDDSSDEEYPPLLLVHGFGASIPHWRRNINTLSQNYTVYAIDLLGFGASEKPPGFSYTMETWAELILDFLEEVIKKPTVLIGNSVGSLACVIAASDSSQKLVRGIVLLNCAGGMNNKAIVDDWRIKLVLPLLWLVDFLLKQKGIASAIFERVKQRENLKNILSSVYGDKESVDEELVEIIREPANDEGALDAFVSIVTGPPGPNPVQLMPKISVPVLLLWGNEDPFTPLDGPVGKYFSSLASEKENVKLCVLEGVGHCPHDDRPELVHEKLLPWLANLSDS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2345 390 PRINTS Alpha/beta hydrolase fold signature 144 159 IPR000073 -
Amo19g2345 390 PRINTS Alpha/beta hydrolase fold signature 325 339 IPR000073 -
Amo19g2345 390 SUPERFAMILY alpha/beta-Hydrolases 94 384 IPR029058 -
Amo19g2345 390 Gene3D alpha/beta hydrolase 93 386 IPR029058 -
Amo19g2345 390 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 37 388 - -
Amo19g2345 390 Pfam Alpha/beta hydrolase family 121 377 IPR000073 -
Amo19g2345 390 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 37 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2345 Amo-Chr19 107067277 107070294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2345 103 387 Miscellaneous Gene Families AT1G80280 25.641 1.10e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2345 - - gmx:100775473 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2345 19 107067277 107070294 Amo19g2345 19 107067277 107070294 ECH