Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1335 ATGTTAGAAGAAGACTTTGACAACGATATCGATGAAGGTTATGTTCATCATCAACACTCTCAAACACACAACTTGTCTCGGCTTTCTGTTTGTACCAGCAGTACTACGTACGACGTAGATGATGATGAAGAGGATGTTAATGATGTCATGGCCATGTTTGTCTCAGGCTTGTCCATAGAAAGCTTGGAAGGCGACGCAGACGCCGACGGCGAATTCTCCGAAGATCACGGCAAAGAGACCCATGCAAGGTGTTCCTCTGGCTCTGAAACCGAGTTCGGTAGCTTTTACTCTTTACCATTTCCTGGGGTGCCAATTCATACACCAATTGCAACCAAGGACTATGAAATTAACAATGATGAGGAGAAAACAAAGAAGAGGAGGATGAGGAGAAGAAGAAAGGGTAGTAAGAGCAAGAACAAAGATAAAGAGGAAGATGATGTGGTTCATGATCAAAGTGTGAAAGGTAGGAGCAGGTCACTGTGCATGGACATGGAGGAAGTGAAGGCTTGTACGGATCTTGGGTTTGGATTCCAGATTCCCACTCGTCTTTCTTTTCCTGGTGATGATCCACGAGAAGTTAAGGCTCGGCTAAAAATGTGGGCACACGCAGTAGCAGTATCTGCATCCAAATACAGCACTTCATTTTAG 648 0.446 MLEEDFDNDIDEGYVHHQHSQTHNLSRLSVCTSSTTYDVDDDEEDVNDVMAMFVSGLSIESLEGDADADGEFSEDHGKETHARCSSGSETEFGSFYSLPFPGVPIHTPIATKDYEINNDEEKTKKRRMRRRRKGSKSKNKDKEEDDVVHDQSVKGRSRSLCMDMEEVKACTDLGFGFQIPTRLSFPGDDPREVKARLKMWAHAVAVSASKYSTSF* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1335 215 MobiDBLite consensus disorder prediction 71 85 - -
Amo19g1335 215 MobiDBLite consensus disorder prediction 66 88 - -
Amo19g1335 215 Pfam Protein of unknown function (DUF1685) 163 179 IPR012881 -
Amo19g1335 215 MobiDBLite consensus disorder prediction 114 155 - -
Amo19g1335 215 MobiDBLite consensus disorder prediction 137 153 - -
Amo19g1335 215 PANTHER OSJNBA0004B13.24 PROTEIN 61 177 - -
Amo19g1335 215 PANTHER OSJNBA0004B13.24 PROTEIN 182 209 - -
Amo19g1335 215 PANTHER OSJNBA0071G03.3 PROTEIN 61 177 - -
Amo19g1335 215 PANTHER OSJNBA0071G03.3 PROTEIN 182 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1335 Amo-Chr19 27269155 27271359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1335 - - aip:107618031 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1335 19 27269155 27271359 Amo09g0756 09 12612259 12614145 hybridization
Amo16g0979 16 15829741 15831053 Amo19g1335 19 27269155 27271359 PCT
Amo06g0056 06 584990 585511 Amo19g1335 19 27269155 27271359 PCT
Amo19g1335 19 27269155 27271359 Amo16g0979 16 15829741 15831053 PCT
Amo19g1335 19 27269155 27271359 Amo06g0056 06 584990 585511 PCT