Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1144 ATGTCGAAGTCCAATTCCAAGAACAAGAAGCTCTCCAAGGAGCCACAGGACTTAGAACTCATCAAATCCGACGTAGCCTCATTCGCCTCTTCCCTTGGCTTGTCCACTTCCCAATCCTATTCCGGTTTCAACGACGTTGATTTCCGCAAGCCAAACAAGCCCCCAAAGAAGGATAAGAAGCAACGCGAAACCGCCACCAAACCACTGCAGCGGAACAACCAAGCACCGAGCACCAAGGAAACAAGTAGAAGCAATGCCCACCATGAGAAGGCAAACCCGAAACCCAAAACCCCGGTTTTGTCACTGGAAGACGGGAACAAGGAGAGAGGGTTCAACAGGTTCAAGAACCTTCCAAAACTTCCTCTGGTGAAGGCGAGCGCGTTGGGAGTGTGGTTCGAGGACGCTGCTGAGCTGGAAGCGAAGGTGGTTGGGGAAGGGAAGAAGGTGGAGGTGAAGGATTTGGAAGAGTGGCGGGGGTTTGTGGAGAAGAAGAGAGAATTGGGTGAGAGGTTGATGGCGCAGTACGCGCAGGACTACGAGTCGACGAGAGGGCAGAGCAGTGATATCAAGATGCTGGTGTCTACACAGAGGTCTGGAACTGCTGCGGACAAGGTCTCTGCTTTCTCTGTGTTAGTTGGAGACAACCCTGTTGCAAACCTSCGCTCAATTGATGCACTTTTAGGAATGGTGACATCCAAGGTTGGGAAGCGCCATGCTTTGACAGGGTTTGAAGCACTTCAAGAATTATTCATTGCGAGCTTATTACCGGATCGAAAATTGAAGACCTTGATACAGCGGCCATTAAATCATGTTCCTGAAACCAAAGATGGATATTCCCTTCTACTGTTCTGGTATTGGGAGGAATGTTTGAAGCAGAGATATGAAAGATTTGTTGTTGCACTTGAAGAAGCGTCACGAGACATGCTACCGGCTCTTAAAAACAAGGCACTAAAGAGCATATATATTCTGTTGAGTAGGAAGTCAGAGCAAGAGCGCAAACTACTTTCTGCTCTTGTTAATAAACTTGGGGATCCGGATAATAGGGCCGCATCTAATGCTGACTATCACTTGTCAAACCTGTTGTCTGACCACCCAAATATGAAGGCCGTGGTTATTGACGAGGTGGATACTTTTCTCTTTCGGCCCCATTTAGGACCACGTTCACAGTACCATGCTGTTAACTTCTTAAGCCAAATCCGTCTAACAAATAGAGGAGATGGACCAAAAGTGGCAAAACGTCTAATAGATGTTTATTTTGCGCTGTTTAAGGTATTAATCTCAAGTGCAAGCAGCAATCAAAAGCTTGATAAAAGCAGCAAGGCAAATCCAAAAGAGCAAAAATCAAAAAGTACACCTGAATCACATGCTGAATTGGACTCCCGGCTTCTTTCAGCACTCCTAACTGGAGTGAATAGGGCATTTCCTTATGTATCAAGCACTGAAGTCGATGACATTGTTGATGTTCAAACCCCAATTCTTTTCCAGTTGGTTCATTCAAAAAATTTTAACGTAGGAGTTCAAGCACTGATGCTTCTCGATAAAATCACATCCAAGAATCAGATAGCTAGTGATCGATTTTACCGTGCATTGTACTCTAAACTTCTGCTTCCAGCTGCCATGAATACGTCCAAGGCAGAAATGTTCGTTGCACTTCTTCTAAGAGCAATGAAAAGAGATGTAAATTTAAAGCGTGTGGCTGCCTTTTCTAAACGTCTATTGCAGGTTGCACTTCAGATGCCACCGCAATATGCCTGTGCATGCCTTTTTCTTCTGTCCGAACTCCTTAAAGCCAGACCACCTCTATGGAACATGGTGTTGCAGAGTGAATCTATTGATGACGAACTAGAACACTTTGAAGATGTTATAGAAGAAACTGATAATGAACCTAGCACCGTATCCAAAAAACAAGCTGATAATATTACCCTTGCTCAGAATGGAGATGATGAAAATAATGATAGTGATTCTTCGGAAGGCAAAGACGATCTTCCAGCATCTTCTGAGGATGACGATGATTCAGATGGTGCTTCAGAGGAGGATGCAGATTTTTTGCTTGCGAAGGATGAACCGAGTATCAAAAAACCGAAGTCTGCATCCAAAAATAAATCAAAATCTGCATCTGATGATGAAGGACAGCAATCTAAGGTATCTGCCAAGAAGTCTTTACTGCCTGGAGGCTATGACCCACGACACCGAGAACCTTCTTATTGCAATGCAGACCGGGTAAGTTGGTGGGAGTTAATGGTACTTGCTTCGCACGCACACCCTTCAGTTTCCACCATGGCCAGAACTCTTCTTTCRGGGGCAAACGTCGTCTACAATGGAAACCCATTAAGTGACCTAAATCTCACAGCTTTCCTTGACAAATTCATGGAGAAGAAACCGAAACAGAGCTCATGGCATGGTGGTTCCCAGATTGAACCTACTAAACAGATGGACATTAACAACCACTTGATTGGCAAAGAAATTCTTTCACTCGCCGAAGAAGATGTGCCCCCAGAAGATCTCGTCTTCCACAAATTCTATACAAACAAAATGAGCTCTAAACCGAAGAAGAAGAAGAAAAAGAAGTCAGCTGATGATGAGGATGCTGACTTCTTTGACGATGACGAGGAGGTTGAAGGTGGGGATGAGAGCGATAATGAAGAGATCGAGAATCTCTTGGATACTGCTGAACCGGACAGTTATGATTATGATGATTTAGACAATGTCGCTGAAGAGGAAGACGATGACTTGATTGGTGATGCCGATATACCGTCGGATATGTCAGGAGGAGAGGCTGACGATGCCATTGATGATGACGACGACGCCACGATTGATGACGATGACGACGACGACGACAACGACGACATTGAGATTGGAGATATTGACGATGCCTCAGATGTTGATTTTGATGAGGATGAAGTCGACAAAAGAAAACAAAAACGAAAACGCAAGAGTGAAAAGGCATCTCCGTTTGCAAGTTACGAAGATTATGAGCATCTAATGGAAGAGGATGGTGACGAGAGTCACAGGACACGGGAAAAACCCGCCGGAAAAAAACACAAGTCCAAAAAGAGTAAAAAATAG 3066 0.4462 MSKSNSKNKKLSKEPQDLELIKSDVASFASSLGLSTSQSYSGFNDVDFRKPNKPPKKDKKQRETATKPLQRNNQAPSTKETSRSNAHHEKANPKPKTPVLSLEDGNKERGFNRFKNLPKLPLVKASALGVWFEDAAELEAKVVGEGKKVEVKDLEEWRGFVEKKRELGERLMAQYAQDYESTRGQSSDIKMLVSTQRSGTAADKVSAFSVLVGDNPVANLRSIDALLGMVTSKVGKRHALTGFEALQELFIASLLPDRKLKTLIQRPLNHVPETKDGYSLLLFWYWEECLKQRYERFVVALEEASRDMLPALKNKALKSIYILLSRKSEQERKLLSALVNKLGDPDNRAASNADYHLSNLLSDHPNMKAVVIDEVDTFLFRPHLGPRSQYHAVNFLSQIRLTNRGDGPKVAKRLIDVYFALFKVLISSASSNQKLDKSSKANPKEQKSKSTPESHAELDSRLLSALLTGVNRAFPYVSSTEVDDIVDVQTPILFQLVHSKNFNVGVQALMLLDKITSKNQIASDRFYRALYSKLLLPAAMNTSKAEMFVALLLRAMKRDVNLKRVAAFSKRLLQVALQMPPQYACACLFLLSELLKARPPLWNMVLQSESIDDELEHFEDVIEETDNEPSTVSKKQADNITLAQNGDDENNDSDSSEGKDDLPASSEDDDDSDGASEEDADFLLAKDEPSIKKPKSASKNKSKSASDDEGQQSKVSAKKSLLPGGYDPRHREPSYCNADRVSWWELMVLASHAHPSVSTMARTLLSGANVVYNGNPLSDLNLTAFLDKFMEKKPKQSSWHGGSQIEPTKQMDINNHLIGKEILSLAEEDVPPEDLVFHKFYTNKMSSKPKKKKKKKSADDEDADFFDDDEEVEGGDESDNEEIENLLDTAEPDSYDYDDLDNVAEEEDDDLIGDADIPSDMSGGEADDAIDDDDDATIDDDDDDDDNDDIEIGDIDDASDVDFDEDEVDKRKQKRKRKSEKASPFASYEDYEHLMEEDGDESHRTREKPAGKKHKSKKSKK* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1144 1021 Coils Coil 608 628 - -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 624 734 - -
Amo19g1144 1021 Pfam CBF/Mak21 family 506 761 IPR005612 -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 679 714 - -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 49 66 - -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 980 1007 - -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 850 1021 - -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 34 104 - -
Amo19g1144 1021 SUPERFAMILY ARM repeat 289 682 IPR016024 -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 663 678 - -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 67 81 - -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 434 456 - -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 862 915 - -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 925 964 - -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 438 456 - -
Amo19g1144 1021 PANTHER CCAAT-BINDING FACTOR-RELATED 16 1012 IPR040155 -
Amo19g1144 1021 MobiDBLite consensus disorder prediction 632 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1144 Amo-Chr19 21672634 21679822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1144 K14832 - gmx:100802669 1400.19