Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1143 ATGGCGAGTATTGTTGACTCGTTCAATCTGTTCAATTTGCCAGAGGCAGTGGAAAAAATGTTGTTCCCTACTCATCATAGCCATGACCATGACCACGCTCGAGAGGGCAGGGTAGTATCAAACATTCCAGTGGATATTTTGGACAATCCCAAAGAGTATGTGTTCTTCATGGATGTTCCGGGTCTCTCCAAATCTGAAATTCAGGTAACCGTGGAAGATGAGAACGCACTTGTTATTAGGAGCAACGGGAAAAGGAAACGTGAAGACGGTGACGACGAAGGCTGCAAGTACCTAAGGCTGGAGAGGAGAGCACCACACAAATTGCAAAGGAAGTTTCGTCTGCCTGAGAACGCTAACCCCTCCGCTATCACAGCCAAGTGTGAGAACGGGGTTCTTACTGTTACTGTTGAGAAACACCCTCCACCAACGAAATCTAAAACAGTTGAAATTGCCATTGCTTGA 462 0.4632 MASIVDSFNLFNLPEAVEKMLFPTHHSHDHDHAREGRVVSNIPVDILDNPKEYVFFMDVPGLSKSEIQVTVEDENALVIRSNGKRKREDGDDEGCKYLRLERRAPHKLQRKFRLPENANPSAITAKCENGVLTVTVEKHPPPTKSKTVEIAIA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1143 153 CDD ACD_sHsps-like 45 138 - -
Amo19g1143 153 Pfam Hsp20/alpha crystallin family 45 150 IPR002068 -
Amo19g1143 153 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 9 153 - -
Amo19g1143 153 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 9 153 - -
Amo19g1143 153 Gene3D - 3 152 IPR008978 -
Amo19g1143 153 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 35 153 IPR002068 -
Amo19g1143 153 SUPERFAMILY HSP20-like chaperones 22 145 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1143 Amo-Chr19 21671474 21672272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1143 K13993 - gmx:100803161 239.58