Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1142 ATGGCGAAAGTGGGAAAACTAACGAAGATCAAGTCAGCGATCAAAAGGTGGCCGTCACTGAGCAAGCTGAGCCGCAACAACAGCTGCGTCTCCGCCGCCAGCTGCGACTCAAACCACGGCGCCGCGTCTTCCAAGGAACAGAACGTTGTGTACGTCGGCAGATCGCGGAGGAGGTACCTCGTGAACTCCGAGATCATAGATCACCCGGTGTTCCAGGAGCTGGTGGACAGGTCCAACAGCAACAATAATAGTAATGGTGGGTGCCATGGCGGAATAGTTGTTTCTTGTGAGGTGGTTCTGTTTGAGCACTTGCTTTGGATGCTTGAGAGTGCTGAGACTCAGTTGGGGTCCATGGATGAGCTGGTTGAGTTCTACACTTGTGCATGCTGA 390 0.5333 MAKVGKLTKIKSAIKRWPSLSKLSRNNSCVSAASCDSNHGAASSKEQNVVYVGRSRRRYLVNSEIIDHPVFQELVDRSNSNNNSNGGCHGGIVVSCEVVLFEHLLWMLESAETQLGSMDELVEFYTCAC* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1142 129 Pfam Auxin responsive protein 15 108 IPR003676 GO:0009733
Amo19g1142 129 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR78 4 127 - -
Amo19g1142 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 127 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1142 Amo-Chr19 21651894 21652685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1142 3 113 Calmodulin-binding Proteins AT4G34750 26.786 1.24e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1142 - - gmx:100806352 177.563