Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1114 ATGTGTAAAGTTGTCTTTTCATTTGTCATGCAGATTTTGAAACCGGCTTTTACAATAATAGTTGATCATGAGATGAGATGTTTCCTATTATTAATTCGGGGAACACACAGTATCAAGGATACTCTAACAGCTGTTACAGGATCTGTGGTACCCTTTCATCATAGTGTAGTTCATCAGGGAGGTGTTAGTGATCTGGTATTAGGTTATGCGCATGGTGGAATGCTTGCAGCTGCTCGATGGATTGCAAAGCTATCAACTCCATGTCTGCTTGAGGCACTTAGTCGTTACCCTTCCTATAATGTTAAGATTGTTGGGCACTCCTTGGGTGGTGGCACAGCAGCACTTCTAACTTATATTCTAAGAGAGCAAAAGACACTGTCTACTACTACATGTGTTGCATTTGCTCCAGCTGCTTGTATGACGTGGGAGTTGGCAGAGTCCGGCAATGATTTTATCACTTCTGTTATAAATGAGGCAGACTTAGTGCCTACATTCTCAGCTGCTTCCGCAGATGACTTGCGTTCTGAGGTTATGGCGTCAGCATGGATAAATGACTTGAGGACTCAAATTCAGCAAACAAGAATAATCAGCACTGTCTGTCGATCTGCTTCAGCACTGGGTTCTCGTCTGCCATCCATTGCTGCTGCTAGATCAAAGGTTGCAGGGGCTGGCGCAATGTTGCAACCTGTTTCTAATGGCACCCAGGTGGTTATGAGGAGGGCCAAAAGTATGGCTCAGGCAGCATGGATGCGTCCAAGTCTTAACCTGTCCTCTTGGTCTTGCATAGGGCCTCGTCGTCGAGCGATTTCTCATTCAACCTCCAATGATGAAGCAAACTCCCCCACATGTTCAACCTCTAACAATGAAGAAAGTTTGGATCAACCTCTTTATAATACCAAGAAAGGGGTGAATTCCGAGAATATGAACATACCTGTATCTTCGTCTATAGAGGAATGGTATTCCGAAATAGGATGTGCCGATGAAAGGAGTATGATTGATGAGAGACATGCTGATCATCCCAGTGACATTTTGGAAGACGGCCGATATGTGGACCACGTGAATGAAGTGTTATTGTGGCATGAGCTGGAGCATCAGTTGTATGAAAGCTCCAACACTGAAGAGGGTAATGTAGTAAAGGAGATAAGGGAAGAAGAAACAGAAATAACAGAGGTTTCTGGTGGGCAAACCCAGAGCTCTACTTCAGAAATGAAGGAAGTTCACAGGTTTTTCCCTCCTGGAAAGATAATGCACATAGTTACACTTCACTGCAATGCTTCTGATAATGAAAACAATAGTAGCCAAACCTCGACGAGTTCGGATGGTCGCGAGCCAGATGAGACAAAGATTGGGATATTTCAAACTCCAAGGTCTTTATATAGCAAAATTAGACTCTCACAAACCATGATCGCTGACCACTTCATGCCGGTTTATAGAAAGCAGATCGAAAGACTGATTCAAGAAGTGGAGGAAGAGGAGGAGGAGGAATAA 1488 0.4382 MCKVVFSFVMQILKPAFTIIVDHEMRCFLLLIRGTHSIKDTLTAVTGSVVPFHHSVVHQGGVSDLVLGYAHGGMLAAARWIAKLSTPCLLEALSRYPSYNVKIVGHSLGGGTAALLTYILREQKTLSTTTCVAFAPAACMTWELAESGNDFITSVINEADLVPTFSAASADDLRSEVMASAWINDLRTQIQQTRIISTVCRSASALGSRLPSIAAARSKVAGAGAMLQPVSNGTQVVMRRAKSMAQAAWMRPSLNLSSWSCIGPRRRAISHSTSNDEANSPTCSTSNNEESLDQPLYNTKKGVNSENMNIPVSSSIEEWYSEIGCADERSMIDERHADHPSDILEDGRYVDHVNEVLLWHELEHQLYESSNTEEGNVVKEIREEETEITEVSGGQTQSSTSEMKEVHRFFPPGKIMHIVTLHCNASDNENNSSQTSTSSDGREPDETKIGIFQTPRSLYSKIRLSQTMIADHFMPVYRKQIERLIQEVEEEEEEE* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1114 495 CDD Lipase_3 21 166 - -
Amo19g1114 495 Pfam Lipase (class 3) 30 167 IPR002921 GO:0006629
Amo19g1114 495 MobiDBLite consensus disorder prediction 270 302 - -
Amo19g1114 495 Coils Coil 474 495 - -
Amo19g1114 495 MobiDBLite consensus disorder prediction 425 440 - -
Amo19g1114 495 SUPERFAMILY alpha/beta-Hydrolases 7 167 IPR029058 -
Amo19g1114 495 Gene3D alpha/beta hydrolase 2 204 IPR029058 -
Amo19g1114 495 MobiDBLite consensus disorder prediction 425 452 - -
Amo19g1114 495 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 11 492 - -
Amo19g1114 495 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 11 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1114 Amo-Chr19 20877888 20880754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1114 12 492 Acyl Lipid Metabolism Gene Families AT3G14075 58.896 5.02e-176 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1114 - - gmx:100807086 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1114 19 20877888 20880754 Amo09g0597 09 8491813 8496660 hybridization