Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1032 ATGTCTTCAGTTCGACGGAGAAGAGGATCGGAAGCTCAGAGCAAAGAGATTCAAGCCGAAGAGAACAACAAAGAAGAAGAAGAAGAAAAAGAACACGGAGAAGATGACAATGATAAGAACAAGAAGAAGAAGAAGATGAAAGATGAGAAGAACAAGGAGAAACAAGAGAAGAAGAGGAAGTGGTCCTGCATCGATAGCTGTTGCTGGTTCGTAGGGTGCATTTGCACGGTGTGGTGGTTGATGCTGTTCTTGTACAAGCTGATGCCGGCTTCGCTGCCGCAGTATGTGACGGAAGCGATCACGGGGCCGTTGCCGGACCCGCCGGGGGTGAAGCTGAAGAAGGAGGGGCTCACGGCAAAGCATCCGGTGGTGTTCGTGCCCGGTATCGTCACCGGTGGGCTTGAGCTCTGGGAGGGACATCAGTGTGCTGAAGGACTCTTCAGGAAACGCTTGTGGGGTGGCACCTTTGGAGAAGTCTACAGGAGACCTTCATGCTGGGCGGAGCACATGTCGCTCGACAATGAAACAGGATTAGATCCACCTGGCATAAGAGTGAGGCCTGTCTCTGGACTTGTAGCTGCTGATTACTTTGCCCCTGGATATTTCGTTTGGGCAGTCCTAATTGCTAACTTGGCTCACATTGGTTATGAAGAGAAAAGCATGTACATGGCTGCATATGATTGGAGAATATCATTTCAGAACACTGAGGTGCGTGATCGAGCATTAAGTCGGATAAAAAGCAATATAGAACTTATGGTTGCTACTAATGGTGGGAACAAGGCAGTTATTCTTCCACATTCAATGGGTGTATTATACTTTCTTCATTTTATGAAGTGGGTGGAAGCACCGGCACCAATGGGTGGTGGGGGTGGATCAGATTGGTGTTCCAAATATATAAAGGCAGTTGTAAACATTGGTGGACCATTTTTAGGTGTTCCCAAGGCTATAGCAGGTCTTTTCTCAGCTGAAGCCAGGGATATTGCTGTTGCCAGGGCGCTTGCACCGGGGTTTTTAGATAATGATCTTTTTCGCCTTCAAACCTTGCAACATGTAATGAGGATGACTCGCACTTGGGACTCAACTATGTCAATGATACCAAGAGGCGGGGAAACTATATGGGGTGGTCTTGATTGGTCACCAGAGGAAGGCTATACCCCTAGCGAGAGAAAGCAAAACTCTAACAATACTCAGTTAACAGGCCAAGAAACAAATAAAACAAATGTTAACTATGGAAGAATGATATCATTTGGCAGAGATGTGGCAGAGGCACCTTCCACTGAGATTGAGATGACTGACTTTCGAGGTGCCATTAAGGGTCATAGCGTTGCAAATACCTCTTGTCGCGATGTGTGGACCGAATATCATGACATGGGAGTTGAGGGAGTAAGAGCTGTCGCTGAACATAAAGTTTACACAGCTAGCTCAATTATAGACCTGCTTCAATTTGTTGCTCCAAAAATGATGGCCCGTGGAAGTGCACATTTCTCTTATGGAATTGCTGACAACTTGGATGATCCTAAATATCAACACTACAAATATTGGTCAAACCCCTTGGAGACAAAACTACCAAATGCTCCAGACATGGAAATCTTCTCCATGTATGGAGTAGGCTTACCAACAGAAAGAGCCTATATTTACAAGTTATCTCCCTATGCTGAGTGCTACATTCCGTTTGAAATAGATACCACAGCAGAAGGTCCTGATGAAGCTAGCTGTCTGAAGGGTGGAGTCTATACTGTCGATGGTGATGAGACCGTGCCGGTTCTAAGCACGGGCTTCATGTGCGCGAAAGGTTGGCGCGGGAAAACCAGATTCAACCCTTTTGGGATTAAGACTTACATTAGAGAATATGAGCATTCTCCTCCAGCAAACTTTCTAGAAGGCAGGGGGACACAAAGTGGTGCCCATGTTGATATAATGGGAAATTTTGCATTGATTGAGGATGTTATAAGGGTGGCGGCAGGGGCCAAAGGAGAAGATCTGCAAGGCGATCAAGTGTATTCCGACATCTTTAAATGGTCTGAGAAAATTAAGTTACGCCTGTGA 2046 0.4609 MSSVRRRRGSEAQSKEIQAEENNKEEEEEKEHGEDDNDKNKKKKKMKDEKNKEKQEKKRKWSCIDSCCWFVGCICTVWWLMLFLYKLMPASLPQYVTEAITGPLPDPPGVKLKKEGLTAKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYRRPSCWAEHMSLDNETGLDPPGIRVRPVSGLVAADYFAPGYFVWAVLIANLAHIGYEEKSMYMAAYDWRISFQNTEVRDRALSRIKSNIELMVATNGGNKAVILPHSMGVLYFLHFMKWVEAPAPMGGGGGSDWCSKYIKAVVNIGGPFLGVPKAIAGLFSAEARDIAVARALAPGFLDNDLFRLQTLQHVMRMTRTWDSTMSMIPRGGETIWGGLDWSPEEGYTPSERKQNSNNTQLTGQETNKTNVNYGRMISFGRDVAEAPSTEIEMTDFRGAIKGHSVANTSCRDVWTEYHDMGVEGVRAVAEHKVYTASSIIDLLQFVAPKMMARGSAHFSYGIADNLDDPKYQHYKYWSNPLETKLPNAPDMEIFSMYGVGLPTERAYIYKLSPYAECYIPFEIDTTAEGPDEASCLKGGVYTVDGDETVPVLSTGFMCAKGWRGKTRFNPFGIKTYIREYEHSPPANFLEGRGTQSGAHVDIMGNFALIEDVIRVAAGAKGEDLQGDQVYSDIFKWSEKIKLRL* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1032 681 MobiDBLite consensus disorder prediction 1 52 - -
Amo19g1032 681 Pfam Lecithin:cholesterol acyltransferase 480 641 IPR003386 GO:0006629|GO:0008374
Amo19g1032 681 Pfam Lecithin:cholesterol acyltransferase 147 422 IPR003386 GO:0006629|GO:0008374
Amo19g1032 681 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 28 681 - -
Amo19g1032 681 MobiDBLite consensus disorder prediction 377 402 - -
Amo19g1032 681 MobiDBLite consensus disorder prediction 34 52 - -
Amo19g1032 681 Gene3D alpha/beta hydrolase 162 335 IPR029058 -
Amo19g1032 681 Coils Coil 7 60 - -
Amo19g1032 681 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 28 681 - -
Amo19g1032 681 MobiDBLite consensus disorder prediction 385 402 - -
Amo19g1032 681 SUPERFAMILY alpha/beta-Hydrolases 119 601 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1032 Amo-Chr19 17856290 17862713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1032 163 681 Acyl Lipid Metabolism Gene Families AT5G13640 77.586 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1032 K00679 - gmx:100800857 1180.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1032 19 17856290 17862713 Amo19g1032 19 17856290 17862713 ECH
Amo19g1032 19 17856290 17862713 Amo09g0538 09 7108108 7114265 hybridization