Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0902 ATGGGGAAAAAGAGGGGATCCGAAATGAACATTTTATTTGGATGGTTGATGAAGTTATCTATCAAAGTTAAAATCTTTTTGGGAACATTGGTTGTGCTTTGTGCTTTGGTGGCTCTAGGTTTTACCATCAAAGATCATGAATATTTCTTCATAGTCGCTGAAGCTGTTCATCTTGCTGGGACTATTGTCCTCTTATACAAGCTCTTCACCAAGAAAACTTGCTCTGGTTTATCACTTAAAACCCAAGAGATCACAGCTTTGTACCTATCAGGAAGATTAATTTGTGGCATGTTGTTGAGAAATGTTGTTGGCATCTACATGTACATTATGCTAGACTTGGTATTTCTCTTGTCAACATTACTCACAATATGGAAGATAAGGTTCAAATTGAAGTCCTCCTATATTAAAGAGCTTGACACTGTACGAGTGCCTTTTATGGTGGTGAGTTGTGCAATCCTTGCTATAATAATCCACCCGCGTTCAAGTGATTTTTCTTTCACCAACACCCTTTGGGCATTCTGTGTGTACTTGGAAGCCATTTCAGTTTTTCCTCAACTTCGTTTCATGCAAAATGCAAAGATGGTAGAAACATTTACAGGATATTATGTGTTTTCGCTTGGTATTTCAAGATTCTTGGCATTGGCTCAATGGATAATTCAGATCTATAAGACTCGAGGATCATATCTATTTTTGCTAGGTAGTGGCAATATTTGGTTCTTGACAGCCTTTCTAGCAGAAATGCTTCAAACAAGGCCAACTTTTGAGGAAAATGCCAATTTAAGGCCTGAGTTACAGATTTATAGTAACCAA 810 0.3753 MGKKRGSEMNILFGWLMKLSIKVKIFLGTLVVLCALVALGFTIKDHEYFFIVAEAVHLAGTIVLLYKLFTKKTCSGLSLKTQEITALYLSGRLICGMLLRNVVGIYMYIMLDLVFLLSTLLTIWKIRFKLKSSYIKELDTVRVPFMVVSCAILAIIIHPRSSDFSFTNTLWAFCVYLEAISVFPQLRFMQNAKMVETFTGYYVFSLGISRFLALAQWIIQIYKTRGSYLFLLGSGNIWFLTAFLAEMLQTRPTFEENANLRPELQIYSNQ 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0902 270 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 250 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo19g0902 270 Pfam ER lumen protein retaining receptor 73 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo19g0902 270 PRINTS ER lumen protein retaining receptor signature 207 225 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo19g0902 270 PRINTS ER lumen protein retaining receptor signature 171 191 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo19g0902 270 PRINTS ER lumen protein retaining receptor signature 49 68 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo19g0902 270 PRINTS ER lumen protein retaining receptor signature 193 207 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo19g0902 270 PRINTS ER lumen protein retaining receptor signature 76 96 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo19g0902 270 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0902 Amo-Chr19 14892510 14897246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0902 1 250 Miscellaneous Gene Families AT3G25160 54.582 7.70e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0902 - K10949 gmx:100790210 303.138