Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0882 ATGGGCTGTTTGGATGAGGGGCATTTCAACGGTGAGCTTGAGAATGAATTGAGTATTGGACTTGGTGAAGTTGGTTTTGATGAAGAGCGTGTTGCTGCCATTGGTGATGCTGTGAAGCTTCTCTTGCAAGGTCTTGGTGAAGATGTAAACAGGGAAGGTCTTAGAAAGACGCCTCTTCGTGTCGCCAAAGCCCTCCTTGAAGGAACCAGAGGTTACAGACAAAAGGTGAATGAAATCGTTGGCGATGCTTTGTTCCCCGAAGCTGGTCTGGACAATAATAGAATCGGTCATGCAGGGGGTGCAGGCGGACTTGTGGTAGTCCGTGATCTWGATCATTTTTCCTATTGTGAATCATGCTTGCTACCATTCCAAATCAAGTGTCATGTCGGTTATGTCCCTTCTGGAAAACGAGTGTTGGGTTTAAGCAAACTTTCTCGTGTGACCGATGTATTTGCTAAACGACTCCAAGAGCCACAACGTCTGGCAGATGAAGTGTGTTTGGGTTTGCAACAGGGAATAAAGCCAGCAGGTGTTGCSGTGATACTTCAGTGTARACATTTACACTTTCCAGATATAGAATCAATCTTTCTTGAGTCAAACCACCAAAGGTGGGTGAATGTRATTGTCTCTTCAGGTTCTGGAGTTTTTGGAAACAAAARTGCAGATGTTTGGACCGATTTYTTTGGCCTACTTAAATTTCGAGATATAGATATTGAAAATGTTCGTCCTAGAGGATCATCTGACCAATGCTGGTGTCCATCTGTGTCTTCTCTTTCTGCTAAAGTTTCGTCAAAAATTGTACCTCTCAATCCTGCAATGGTCACAGCTGTATCTTCAATTCTAAAATCACTGGGAGAAGATCCGATGCGGAAGGAACTTGCGGCAACTCCTAGCCAATATGTGAAATGGTTGTTGAATTTCCAAAGCATTGACATGGATGTGAAGTTGAAYGGTACTCTTTCTGGTGGCYTAAACYCTCTGAACTCCAATTTGGAAGTAAACTCCAACAACAAACAAATATGCTCTGAGCTGAACTTGCCCTTTTGGTCGCAGTGCGAGCATCATYTACTTCCATTTCAYGGAGTTGTTCACATAGGATACTTCCTTTCCGAAGGCTTCACTTGCATCGGAAAATCCCTTTTGCAATCAATTGTACATTTTTATGGTTTCAAGCTCCAGCTTCAGGAACAGCTTACAAGGCAGATAGCTGAAACCATTTCGCCATTGTTAGGTGGAAATGTAATAGTAGTTGTAGAGGCCAGCCATACATGCATGATCTCTAGGGGAATTGAGAAGSTYGGAAGTAGCACATCTACCATTGCTGTATTAGGACACTTCTCAACTGACCGCGCTGCAAGGGCYGCATTCTTGCAAAGTATTCCTACTCCTACATATTGCGAAGGGCAATAG 1410 0.4312 MGCLDEGHFNGELENELSIGLGEVGFDEERVAAIGDAVKLLLQGLGEDVNREGLRKTPLRVAKALLEGTRGYRQKVNEIVGDALFPEAGLDNNRIGHAGGAGGLVVVRDLDHFSYCESCLLPFQIKCHVGYVPSGKRVLGLSKLSRVTDVFAKRLQEPQRLADEVCLGLQQGIKPAGVAVILQCXHLHFPDIESIFLESNHQRWVNVIVSSGSGVFGNKXADVWTDFFGLLKFRDIDIENVRPRGSSDQCWCPSVSSLSAKVSSKIVPLNPAMVTAVSSILKSLGEDPMRKELAATPSQYVKWLLNFQSIDMDVKLNGTLSGGLNXLNSNLEVNSNNKQICSELNLPFWSQCEHHLLPFHGVVHIGYFLSEGFTCIGKSLLQSIVHFYGFKLQLQEQLTRQIAETISPLLGGNVIVVVEASHTCMISRGIEKXGSSTSTIAVLGHFSTDRAARAAFLQSIPTPTYCEGQ* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0882 469 Gene3D - 268 315 IPR043134 -
Amo19g0882 469 Gene3D - 26 79 IPR043134 -
Amo19g0882 469 Gene3D - 329 462 IPR043133 -
Amo19g0882 469 PANTHER GTP CYCLOHYDROLASE I 1 463 IPR001474 GO:0003934|GO:0046654
Amo19g0882 469 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 270 461 - -
Amo19g0882 469 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 27 189 - -
Amo19g0882 469 Gene3D - 98 234 IPR043133 -
Amo19g0882 469 Pfam GTP cyclohydrolase I 275 460 IPR020602 -
Amo19g0882 469 Pfam GTP cyclohydrolase I 36 187 IPR020602 -
Amo19g0882 469 PANTHER GTP CYCLOHYDROLASE I 1 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0882 Amo-Chr19 14454791 14458810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0882 K01495 - gmx:100780537 674.085