Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0798 ATGGGAACTGTTGTTGAAGCTGCTAACAAGGGTGCAAGCGGAAGCATTCTACAGAAAAGAAATCCTACAATCGTTTTTGTGTTAGGTGGGCCAGGAAGTGGAAAGGGCACCCAATGTGCTAACATTGTGGAGCACTATGGGTATACTCACCTAAGTGCTGGTGATCTTCTACGAGCAGAAATAAAATCTGGTTCTGAAAATGGTACAATGATTCAAAATATGATTAAAGAAGGAAAAATTGTTCCATCGGAGGTTACAATTAAGCTTCTGCAACGAGCAATGGAGGAAAGTGGCAAGGACAAATTTCTTATTGATGGTTTTCCTCGTAATGAGGAAAACCGAGCAGCATTTGAGAAAGTGACAGGAATGGAACCATCTTTTGTCCTGTTTTTTGATTGTCCAGAGGAGGAAATGGAGAGGCGACTTTTAAATAGGAACCAGGGGAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTCAGGGTTTTCTTGGAGTCTAGTGTCCCTGTGATTAGTTATTATGATGCAAAGGGTAAAGTTCGTAAGATTGATGCTGCAAGACCTGTTGAAGAGGTATTTGCCTCAGTTAAAGCAATTTTTGAACCAAAAAATGAGAAGGTAAACCATTATGTTCGCATTATGTCAAAACTTTATATGTACAAGTTCCATTTTGCAGTGAAGAGAAAATTAATAAGTCTGTGTTGTCATCGTTGTTAA 720 0.3903 MGTVVEAANKGASGSILQKRNPTIVFVLGGPGSGKGTQCANIVEHYGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQRAMEESGKDKFLIDGFPRNEENRAAFEKVTGMEPSFVLFFDCPEEEMERRLLNRNQGREDDNIETIRKRFRVFLESSVPVISYYDAKGKVRKIDAARPVEEVFASVKAIFEPKNEKVNHYVRIMSKLYMYKFHFAVKRKLISLCCHRC* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0798 239 Gene3D - 12 202 IPR027417 -
Amo19g0798 239 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 24 202 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Amo19g0798 239 ProSitePatterns Adenylate kinase signature. 102 113 IPR033690 -
Amo19g0798 239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 202 IPR027417 -
Amo19g0798 239 Hamap Adenylate kinase [adk]. 23 202 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo19g0798 239 Pfam Adenylate kinase 27 179 - -
Amo19g0798 239 CDD ADK 24 193 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo19g0798 239 PRINTS Adenylate kinase signature 26 39 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo19g0798 239 PRINTS Adenylate kinase signature 54 68 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo19g0798 239 PRINTS Adenylate kinase signature 102 118 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo19g0798 239 PRINTS Adenylate kinase signature 149 164 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo19g0798 239 PRINTS Adenylate kinase signature 166 180 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo19g0798 239 PANTHER NUCLEOTIDE KINASE 1 208 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo19g0798 239 PANTHER UMP-CMP KINASE 1 208 - -
Amo19g0798 239 Hamap UMP-CMP kinase [CMPK1]. 22 204 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0798 Amo-Chr19 12571479 12578972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0798 K13800 - gmx:100500111 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0798 19 12571479 12578972 Amo02g0115 02 1313742 1320372 hybridization